Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1265 ATGGAGTTAGAGGTGAAGCTAGTGGGTAGCATAGACAACTGCTTCGTATCGCTCCCTCTTCCTCTCGTCCAAATCCTGCAGGCCACACGCTCAGCGCCACTCCCTCATATTCTCGCACTCGAGCTTCGCTCTCGCACTGATGATCTCTGGGTCGTTGCTTGGTCCGGAGCCACTTCCGCTTCTGCCGCCATAGAGGTTTCCCAACAATCTGCAGAATGCATTTCCTTGCCACATCATGCTAAAGTTCAAGTAAGAGCTGCTTCTAATGTACCGCATGCTTCTCTAGTTACAATAGAACCCCATACAGAAGATGACTGGGAAATTTTGGAGCTGAACTCAGAGCAAGCTGAGGCAGCAATTTTAAACCAGCTCAGGATTGTTTACGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCACACAATGATTACATTCAATGTGGCTTCTGTTTTTCCCAAGAAAGCGGTGGGTATGATGATGTCCAGTGGTTTCTACACACTTTTTGATACTACAGATTGGTCAATCCATAATGAAGTTATTAATGTTGTTCTGGATGAATCCCATtacaaagaagatgaagaggttGCAAATCAGTCAGAAAATAAGAAAGGATTGCAGCATCTTCTAAGATTCTGGTATATTGCACAACTTGATGCAATTACTTCCTTTACTGATTCTCTGCATCATGGAAAACATAATGCATATGAAGTTGCTCTTGGTGAAAGAAACGAGGTGAATAGTAATCAGGAAGATCTCCAGCAGTTTAAAAATCTGAAGTTTGGTGGTCCTGTCTCCTTTCAGACTATAGAAGATATGATCTCTAAAGAACACATTAGTTCAGAAGTAACTTCCCTTGGCTGGATGGAAGCTACTGTTTCTGATGTTAAAATAGTAGGGATGATGGTATTGTTATCTTCTGCTTCTGGTACGTGGTTTGATTTTTACAACTTACCACTACCTGGACATGTTCTTATATATGGGCCTTCAGGCTCTGGCGAAACTTTACTAGCAAGGACTGTTGCAAAATGCCTTGAGAAACATGAAGACATCGTAGCACACAAAATTTTTGTTTCATGCTCAAAACTCTCTTTGGAAAAGGTCCCAATGATCCAAAAGGAAGTTACTAACATCATAATGGAAGCCTTAGATCATGCACCTTCTATTGTCATCTTTGACGATCTTGATAGCATAATTTCTACCTCTGACTCAGAAGGATCTCAACCCTCAATATCAGCTGCTGGACTCGCAGGAGAGAAGACGAAAATCATGTGGATTTGGACCAATAGCATTCATAGCTTCTGTACAATCACTAGAGAAGATACCACAGTCTCTGAGCTCTTCAGAGTGAAAGTTGGACCGCTGCCATATTCAGACATATTGGTTTTAGCTCCAGAAAATGTTCTGCATCTCTATGGTCAGCCTTTGCGTGACTTGGAATTTCCAGAAACAGCTTCTCTTTCCCATGATATAAAAATTACTGGCCTGGCTGATGCAGTTGGGGGGCGTGTCAATGTGATAGTAAATAATATGAAGATGTTTAGATGTGCATTACGACAAAGTCCATCATCTTTATTAGCTAATGATTGCATCACAGCACTTGCTGAGGGGCTTAGTTTCAGCTTCTACAGATATTTGCTTGGTCATCTCTGGAAAGATGGTGACCCTGCTCATTTAACGGTTGCTGACTCTGGTGTTGATTCAGAATGGGACTCTTTCTGTCGTGTAATTATGCAATTGTGCAGAGAATCTAACTTGATGTCTCAAAAGCATTTGACTTCAGTATCACACTCAGCTTGGGACTTTCTTCTTAGCAGCCAATTTCATAGGAACTTCTGCAAAATAAACACCATTTCTGGAATATCTCGTGCAGCATCACTTGACCAACAGGAGACAAATTCCCCTAGTTCAGCAATGGATGTCTATGAGAGCCTGAAACTGGATAATCTTCGAAAAGGGGACTTGGAGCTTTTAGCTATTCTCTTATGCAACATTGCTGAATATCTGGGTGAGGAAAACTACTTGGATCATTATATTCGGGATTTCCCTGGCCTTTCTACACAATGGAAGCTCTGTGGCGAGCTGGGCTCGGAAAATAGTCTTTTTTATAGTATATTCTCTGGTGCTAAATTTTTTGGAAAGAAGCTTTCTTCTGGTGTTTACTGTAATGTTGCCACGGGGACGCATTGTTCAAAAGAGGAACTAACTGTATTGGCAATGGTTGGGGAGAGGTTTGGACTACAACAGCTAGACTCACTCCTCCGGTGTATCTCTTCCACTGCGTCATATAAGTGTCTAGATTCTCCTCCCAATGACTGGCCATCGGCTGCTTATGTCCTTCTTGGTCGACAAGATTTGGCAATGTCATCTTTGACTCGTGAATGCAAGTATAGGGAAATTGAAAGACCAACCAATGTGAATGTAATCTCTATGTCTACGCCTTATATGCTGAACCTGCATCCAGTGACAATATCTTCTACTATTTCTGATGCAATTGGGTTGGAAGGTACAAAGTTTGAAGATACAGATTCAATCGATGACTTGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGCTCTTTCTTGGCTCGCCGAACCTGCCAATGCCGGAAATACTTGGAAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAAATGCGGAAACTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCATGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAATCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGGCGTTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCATCGGCTGCTTATGTCCTTCTTGGTCGACAAGATTTGGCAATGTCATCTTTGACTCGTGAATGCAAGTATAGGGAAATTGAAAGACCAACCAATGTGAATGTAATCTCTATGTCTACGCCTTATATGCTGAACCTGCATCCAGTGACAATATCTTCTACTATTTCTGATGCAATTGGGTTGGAAGGTACAAAGTTTGAGGATACAGATTCAGTCGATGACTTGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCATGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAATCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGTAAAACGGAAAAGAGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCATGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAATCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTAACAACGGAAAAGAGGCGTTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCATCGGCTGCTTATGTCCTTCTTGGTCGACAAGATTTGGCAATGTCATCTTTGACTCGTGAATGCAAGTATAGGGAAATTGAAAGACCAACCAATGTGAATGTAATCTCTATGTCTACGCCTTATATGCTGAACCTGCATCCAGTGACAATATCTTCTACTATTTCTGATGCAATTGGGTTGGAAGGTACAAAGTTTGAGGATACAGATTCAGTCGATGACTTGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCAGCCAATGCCGGAAATACTTGGCAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATTGCGGAAACTCAAGatgGGTTTTCTTTCATCCCCATCTTCTGCCAGCCTTGCTGCCCCTGTAATGGAAGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTACTTTTCGAGCAACAGCTCACAGCTTATGTGGAGAAGATTTCCGGCATTATTCGGGACAACTTGAAGAAGGAGTTATCATCGTTGCTCTCATTATGCACCAAGAACATCAAAAGGAGTGCACGAACAGGCCGATCCTTTGCTAAAGATTCTCCAACAGATCACTGGCAGAGTATTATTGAATCCCTCAACACTTTGCTGTGTACACTGAAAGAAAACTTTGTGCCTCCAGTACTTACCCAGAAGATCTTCACTCAGACATTCTCATATATTAATGTACAACTCTTCAACAGCAATGGGGAATATGTAAAAGCTGGTTTAGCCGAACTGGAGCTATGGTGCTGCCAAGCTAAGCAAGagCCAGACGCCTATCCTCAAGGTGATGTAGATAGAGTTGAGGATAGCCATGTTTTTGACAGTCAGACAGAAGATGGTATGCTGCAAGCTGCAATTTTGCTCTTACTGCTTTCTTCAGCTGCATTTGTATTGCCAAGTCGTGAAGCCATGTGTCTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTATGGACACGAATTCTGAAGTTAGAAAGATATCTGCTCAACTTCTTGTATATCTTCTGAACATAAGTACGGCTCTTTCTATGGCGATGGTATTATTTTCTCATGGAATCATGAATGGCAATATGACTGTTGGTGATTTGGTGATGGTGAATGGACTTCTCTTCCagctctctcttcctctcactTTCCTTGGTAGTGTATATCGTGAGACTGTGCAGAGTCTAGTCAACATGAAGTCCATGTTTCAGTTACTGGAGGTGGCGCCTGCAAAGGCACGGGACTTTGATGTCAACAGTCTGAATTCTACGTCACAAGATTTCTTCTTTACCTTGTCTTGCTTTATTTACTATGGTGTTTTCAGGATTTCCTTGGTTCATTTAAGTGGTCTTTTCTACCTTGGTGTGCTTGGGATAACTGCTTGTCTGAAGATGTGGCTTAAAAACAGGTGGTGCATCTTAAGTCACGGACTTGGGGATATGGTTATGGTTACCTTGTTTAAGATTTCCGCGTTTCATTTAAGCGGTCCTTGGTACCTTGTTCTGATTGTTTGCTTGAAAGAAGTGGCTTACAAATTGGAAGGCATACATAAGGCTTGA 5886 0.4151 MELEVKLVGSIDNCFVSLPLPLVQILQATRSAPLPHILALELRSRTDDLWVVAWSGATSASAAIEVSQQSAECISLPHHAKVQVRAASNVPHASLVTIEPHTEDDWEILELNSEQAEAAILNQLRIVYEGMRFPLWLHGHTMITFNVASVFPKKAVGMMMSSGFYTLFDTTDWSIHNEVINVVLDESHYKEDEEVANQSENKKGLQHLLRFWYIAQLDAITSFTDSLHHGKHNAYEVALGERNEVNSNQEDLQQFKNLKFGGPVSFQTIEDMISKEHISSEVTSLGWMEATVSDVKIVGMMVLLSSASGTWFDFYNLPLPGHVLIYGPSGSGETLLARTVAKCLEKHEDIVAHKIFVSCSKLSLEKVPMIQKEVTNIIMEALDHAPSIVIFDDLDSIISTSDSEGSQPSISAAGLAGEKTKIMWIWTNSIHSFCTITREDTTVSELFRVKVGPLPYSDILVLAPENVLHLYGQPLRDLEFPETASLSHDIKITGLADAVGGRVNVIVNNMKMFRCALRQSPSSLLANDCITALAEGLSFSFYRYLLGHLWKDGDPAHLTVADSGVDSEWDSFCRVIMQLCRESNLMSQKHLTSVSHSAWDFLLSSQFHRNFCKINTISGISRAASLDQQETNSPSSAMDVYESLKLDNLRKGDLELLAILLCNIAEYLGEENYLDHYIRDFPGLSTQWKLCGELGSENSLFYSIFSGAKFFGKKLSSGVYCNVATGTHCSKEELTVLAMVGERFGLQQLDSLLRCISSTASYKCLDSPPNDWPSAAYVLLGRQDLAMSSLTRECKYREIERPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSIDDLIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSFLARRTCQCRKYLEKLHFRKLKKATITTQCAWRGKIARREMRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEHEAAKRAAEIVPIIKEVPVIDHALLEKLTSENEKLKALDKCRDSPPNDWPSAAYVLLGRQDLAMSSLTRECKYREIERPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSVDDLIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKEVKESHYYNTMCMERKNCPARMRKLKMAARETGALQAAKNKLEKQVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEHEAAKRAAEIVPIIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGVKRKRGCKRNWSSPSCQNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEHEAAKRAAEIVPIIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGNNGKEALDKCRDSPPNDWPSAAYVLLGRQDLAMSSLTRECKYREIERPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSVDDLIGKTKVFLRAGQMAELDTQPMPEILGKLHFRKLKKATITTQCAWRGKIARRELRKLKMGFLSSPSSASLAAPVMEVVRKVEAKYPALLFEQQLTAYVEKISGIIRDNLKKELSSLLSLCTKNIKRSARTGRSFAKDSPTDHWQSIIESLNTLLCTLKENFVPPVLTQKIFTQTFSYINVQLFNSNGEYVKAGLAELELWCCQAKQEPDAYPQGDVDRVEDSHVFDSQTEDGMLQAAILLLLLSSAAFVLPSREAMCLGDRVIMYLPRCMDTNSEVRKISAQLLVYLLNISTALSMAMVLFSHGIMNGNMTVGDLVMVNGLLFQLSLPLTFLGSVYRETVQSLVNMKSMFQLLEVAPAKARDFDVNSLNSTSQDFFFTLSCFIYYGVFRISLVHLSGLFYLGVLGITACLKMWLKNRWCILSHGLGDMVMVTLFKISAFHLSGPWYLVLIVCLKEVAYKLEGIHKA 1961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1265 1961 Pfam ATPase family associated with various cellular activities (AAA) 323 406 IPR003959 GO:0005524|GO:0016887
Sto12g1265 1961 SUPERFAMILY Cdc48 domain 2-like 91 161 IPR029067 -
Sto12g1265 1961 Pfam IQ calmodulin-binding motif 1531 1550 IPR000048 GO:0005515
Sto12g1265 1961 Pfam IQ calmodulin-binding motif 907 926 IPR000048 GO:0005515
Sto12g1265 1961 Pfam IQ calmodulin-binding motif 873 891 IPR000048 GO:0005515
Sto12g1265 1961 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1778 1836 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto12g1265 1961 Gene3D - 91 172 - -
Sto12g1265 1961 CDD AAA 317 397 - -
Sto12g1265 1961 ProSiteProfiles Dilute domain profile. 1567 1837 IPR002710 -
Sto12g1265 1961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1490 1558 IPR027417 -
Sto12g1265 1961 Coils Coil 1181 1211 - -
Sto12g1265 1961 PANTHER BNAC02G02260D PROTEIN 1407 1496 - -
Sto12g1265 1961 PANTHER BNAC02G02260D PROTEIN 701 847 - -
Sto12g1265 1961 PANTHER BNAC02G02260D PROTEIN 445 696 - -
Sto12g1265 1961 PANTHER BNAC02G02260D PROTEIN 1034 1122 - -
Sto12g1265 1961 PANTHER MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER 445 696 IPR024990 GO:0005680
Sto12g1265 1961 PANTHER MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER 1407 1496 IPR024990 GO:0005680
Sto12g1265 1961 PANTHER MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER 701 847 IPR024990 GO:0005680
Sto12g1265 1961 PANTHER MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER 1034 1122 IPR024990 GO:0005680
Sto12g1265 1961 ProSiteProfiles IQ motif profile. 1529 1558 IPR000048 GO:0005515
Sto12g1265 1961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 846 938 IPR027417 -
Sto12g1265 1961 Coils Coil 1300 1320 - -
Sto12g1265 1961 Coils Coil 928 962 - -
Sto12g1265 1961 ProSiteProfiles IQ motif profile. 905 934 IPR000048 GO:0005515
Sto12g1265 1961 Gene3D - 1520 1555 - -
Sto12g1265 1961 Gene3D - 264 435 IPR027417 -
Sto12g1265 1961 Gene3D ABC transporter type 1, transmembrane domain 1766 1853 IPR036640 GO:0005524|GO:0016021
Sto12g1265 1961 SUPERFAMILY ABC transporter transmembrane region 1776 1852 IPR036640 GO:0005524|GO:0016021
Sto12g1265 1961 SMART iq_5 870 892 IPR000048 GO:0005515
Sto12g1265 1961 SMART iq_5 1528 1550 IPR000048 GO:0005515
Sto12g1265 1961 SMART iq_5 904 926 IPR000048 GO:0005515
Sto12g1265 1961 Gene3D - 818 896 - -
Sto12g1265 1961 Gene3D - 1092 1187 - -
Sto12g1265 1961 Pfam Peroxisome biogenesis factor 1, N-terminal 96 156 IPR015342 GO:0005524|GO:0005777|GO:0007031
Sto12g1265 1961 SMART AAA_5 319 457 IPR003593 -
Sto12g1265 1961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 406 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1265 Sto-Chr12 8129081 8148052 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1265 1527 1701 Myosins gene family AT1G04160 52.356 3.02e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1265 K03348 - gmx:100778607 542.347