Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1264 ATGGTGAATGAAGCCAACGCGCGAGTGCAAGACCCAGTGTATGGGTGCGTTGGTGCCATCTCTTCTCTTCAGCACCAACTTGATGGGCTTCGGGCCCAACTGGCTCTGGCCCAGGCCGAGGTGGCCCACCTCAGGATGCTTCCTAGCCCAACCACTTGTGCTGCCTCGGTCTCACCACCATCGCCCAACATTTTCATGCACTCCGACTCGCAACCCCAATCTATATTTGACATGGACCAACCCATCTATGATGATGATTCAATGTGGCCACGCTAG 276 0.5543 MVNEANARVQDPVYGCVGAISSLQHQLDGLRAQLALAQAEVAHLRMLPSPTTCAASVSPPSPNIFMHSDSQPQSIFDMDQPIYDDDSMWPR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1264 91 MobiDBLite consensus disorder prediction 53 77 - -
Sto12g1264 91 Pfam Lateral organ boundaries (LOB) domain 2 38 IPR004883 -
Sto12g1264 91 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 79 - -
Sto12g1264 91 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 79 - -
Sto12g1264 91 Coils Coil 20 47 - -
Sto12g1264 91 MobiDBLite consensus disorder prediction 53 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1264 Sto-Chr12 8125701 8125976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1264 1 89 AS2 family AT1G16530 50.515 1.73e-19 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto12g1264 LOB 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1264 - - nta:107770680 89.7373