Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1260 ATGTCGGTCGGCGTCCGCTGCTTAACGGTGCTCGGGGAATTTAAGCCGTTTGGCTTGATTGCTGAAGCTCTAGACGGAAAACCTTCCGATATAGTTACTGACAAGTACGATTATTTCCTTTTCGACCCTGAAGTCGCTCGAGACCGAGACGAGGAAGATAACTATGACGAGGCTGCTTCCGCATTGTGTAATCAGGGTGATCACGAGCTATTCATCAGAGGGAACCGGATTATATGGTCGACGGGTTCAAGGGTTTTTAAGAGATTTACTTTGCGTTCCCCTGTTGTTatgGTATGCTGGTCTTCTCTGGGTCATACATCTGAAGCTCTTCTTTGCATATTACAGATAGATTGTTTGACAATCTATAATACCTCAGGAGAAGTAGTATCTCTTCCACTTCCTTGTACAATCTCATCTATATGGCCTCTTCCATTTGGTTTATTACTCCAGCAGGAGGTTGAAGCAAATATACCATCATCTGTTCCCTTTTCATCGTTGAGCCCTTTGCTAAGTACACGTGAGTCTTGGCGCCCAAGAAGAGAACTTGGTCACAGTCCACAACATTGTTTTAGTCCCTTTTCTGCACTCAATCATATCCAAAAGGGAGAGGCGACTTCAATATCATCACATCTCATTTTCATGGATACTCTGGATGAACAACAACCAACTTTTATTGAAGAAAGAGGGAAATTGAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGATCTGGTCCCTCTTATGGCATCCTATAATAAAGGAAAGATGCAGCACTCTCTGTGGGTTGCAGAAATCATTAGTTCTAACCTTGATGAAGTAGACACCAGTTTATTAAATGTAGATCCTGCAGGTGTAGTGCCGAAATATTTGTCCTTCGTAGAATATGGCCAGGAAAAGGTGCCCATACAGCTGCTTGTTTTCATGGCTACTGATGATGATGCAGCTCCTTTGGTCTGCTTTCTTTACCAAGAACAGAGAAAATTGTTATCTGTGAGGCTTCAGAGTgttgaaataaataatgaagTTTCCTTTGACGTTAAACCTGATATGAGCTGGAGCAAACCTGCAATTTCAGCTTCACCTGTGATTGTAACTCAGCCAAGAGTGAAAGTTGGACCGCTGCCATATTCAGACATTTTGGTTTTAGCTCCAGAAAATGTTCTGCATCTCTATGGAATTATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCCACTAGAAAAACCTTCGATAAATTTGTGGATCGATTTGGCCTTCTTGCACCTGAAGCTTTGGATGGAAATTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTAAAGGCTACCAGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACTTGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATTGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCTAATCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGCTTGAAGAGAAGTTCTCAAATATTGAATCTGAAAACCAAGTTCTGCAGTACCAACCTCTGAGAAACCCATCTGTTAAAAAGATGTCTGAGCACCTCTCTATTCCTGTAGCTGAGAAGCAGGAAAATGGTCACCCTGAGGTAGAAGAGCATAAAGCTGGTGCGAGTACTATTACTGAATCTCCTAGTGTGACACCGGTAAAGAAGTTTGGTACAGAATCTGATAGCAAATTGAGGAGATCATACACTGAGCGTCAACATGAGAATGTTGATGCACTTATCAATTGTGTTACTAAGAATATTGGGTTCACTCGTGGAAAGCCTATAGCTGCAATTAGCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACTAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCCATTGAGAATCAAGATGACAATGACCTTATGGCCTATTGGCTGTCAAATACTTCTGCATTATTGTCCTTGCTCCAACAAAGTTTGAAATCTGGTGGCACAACTGAGGCAACGCCAGTTAAAAAAACACCTAATCCAACAATGACTATGGGTTTTCTTTCATCCCCATCTTCTGCCAGCCTTGCTGCCCCTGTAATGGAAGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTACTTTTCGAGCAACAGCTCACAGCTTATGTGGAGAAGATTTCCGGCATTATTCGGGACAACTTGAAGAAGGAGTTATCATCGTTGCTCTCATTATATTTTATTCCTGACATGCAGGCACCAAGAACATCAAAAGGAGTTGCACGAGCAGGCCGATCCTTTGCTAAAGATTCTCCAACAGATCACTGGCAGAGTATTATTGAATCCCTCAACACTTTGCTGTGTACACTGAAAGAAAACTTTGTGCCTCCAGTACTTACCCAGAAGATCTTCAGTCAGACATTCTCATATATTAATGTACAACGCTTCAACAGCAATGGGGAATATGTAAAAGCTGGTTTAGCCGAACTGGAGCTATGGTGCTGCCAAGCTAAGCAAGagGCATTTTCTCAGCACATGGCGCTGTCAGTTTTGTTCATTGAACATGTGATCTCTGTACTTAGCCAGACGCCTATCCTCAAAGGTGATGTAGATAGAGTTGAGGATAGCCATGTTTTTGACAGTCAGACAGAAGATGGTATGCTGCAAGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGGTCTGTATTATCATCTGCATTTGTATTGCCAAGTCGTGAAGCCATGTGTCTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTATGGACACGAATTCTGAAGTTAGAAAGATATCTGCTCAAGCGTTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCATCGGCTGCTTATGTCCTTCTTGGTCGACAAGATTTGGCAATGTCATCTTTGACTCGTGAATGCAAGTATAGGGAAATTGAAAGACCAACCAATGTGAATGTAATCTCTATGTCTACGCCTTATATGCTGAACCTGCATCCAGTGACAATATCTTCTACTATTTCTGATGCAATTGGGTTGGAAGGTACAAAGTTTGAGGATACAGATTCAATTGGTAAAGCAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACATGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATTGCGGAAACTCAAGatgGGTTTTCTTTCATCCCCATCTTCTGCCAGCCTTGCTGCCCCTGTAATGGAAGTTGTACGCAAGGTAGAGGCTAAATACTCTGCTTTACTTTTCGAGCAACAGCTCACAGCTTATGTGGAGAAGATTTCCGGCATTATTCGGGACAACTTGAAGAAGGAGTTATCATCGTTGCTCTCATTATATTTTATTCCTGACATGCAGGCACCAAGAACATCAAAAGGAGTTGCACGAACAGGCCGATCCTTTGCTAAAGATTCTCCAACAGATCACTGGCAGAGTATTATTGAATCCCTCAACACTTTGCTGTGTACACTGAAAGAAAACTTTGTGCCTCCAGTACTTACCCAGAAGATCTTCACTCAGACATTCTCATATATTAATGTACAACTCTTCAACAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTAAAAGCTGGTTTAGCCGAACTGGAGCTATGGTGCTGCCAAGCTAAGCAAGagGCATTTTCTCAGCACATGGCGCTGTCAGTTTTGTTCATTGAACATGTGATCTCTGTACTTAGCCAGACGCCTATCCTCAAAGGTGATGTAGATAGAGTTGAGGATAGCCATGTTTTTGACAGTCAGACAGAAGATGGTATGCTGCAAGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGATTCTTGATCAACTCTTCAGCATTTCTCTCTCACTTCCAAGGTCTGCAGCTTCTTGTATATCTTCTGAACATAAGTACGGCTCTTTCTATGGCGATGGTATTATGTTCTCATGGAATCATGAATGGCAATATGACTGTTGGTGATTTGGTGATGGTGAATGGACTTCTCTTCCagctctctcttcctctcactTTCCTTGGTAGTGTATATCGTGAGACTGTGCAGAGTCTAGTCGACATGAAGTCCATGTTTCAGTTACTGGAGGTGGCGCTTTCGACCTTGTTTATGATTTCCTTGGTTCATTTAAGTGGTCTTTTCTACCTTGGTCTGCTTGGGATAACTGTGTGCTCTGGATATTCTTTTAAGAAGATTCTGATTTCTGAGCAACTAGATTTCTTCTTTACTCTGTCTGGCTTGCATTTGGTTATTTCAGGTGGCGCTTTTGAAGTCATGCCATCTTTGGTGTCTGGTTTTGGTTACCTTGTTTAA 4914 0.416 MSVGVRCLTVLGEFKPFGLIAEALDGKPSDIVTDKYDYFLFDPEVARDRDEEDNYDEAASALCNQGDHELFIRGNRIIWSTGSRVFKRFTLRSPVVMVCWSSLGHTSEALLCILQIDCLTIYNTSGEVVSLPLPCTISSIWPLPFGLLLQQEVEANIPSSVPFSSLSPLLSTRESWRPRRELGHSPQHCFSPFSALNHIQKGEATSISSHLIFMDTLDEQQPTFIEERGKLNIMKEYDEKTIWTSDLVPLMASYNKGKMQHSLWVAEIISSNLDEVDTSLLNVDPAGVVPKYLSFVEYGQEKVPIQLLVFMATDDDAAPLVCFLYQEQRKLLSVRLQSVEINNEVSFDVKPDMSWSKPAISASPVIVTQPRVKVGPLPYSDILVLAPENVLHLYGIMEAIRISCAGYPTRKTFDKFVDRFGLLAPEALDGNSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYLAKLHFRKLKKATITTQCAWRGKIARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEREAAKRAAEIVLIIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGETEKRLEEKFSNIESENQVLQYQPLRNPSVKKMSEHLSIPVAEKQENGHPEVEEHKAGASTITESPSVTPVKKFGTESDSKLRRSYTERQHENVDALINCVTKNIGFTRGKPIAAISIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLSLLQQSLKSGGTTEATPVKKTPNPTMTMGFLSSPSSASLAAPVMEVVRKVEAKYPALLFEQQLTAYVEKISGIIRDNLKKELSSLLSLYFIPDMQAPRTSKGVARAGRSFAKDSPTDHWQSIIESLNTLLCTLKENFVPPVLTQKIFSQTFSYINVQRFNSNGEYVKAGLAELELWCCQAKQEAFSQHMALSVLFIEHVISVLSQTPILKGDVDRVEDSHVFDSQTEDGMLQAAIFALTAFFRSVLSSAFVLPSREAMCLGDRVIMYLPRCMDTNSEVRKISAQALDKCRDSPPNDWPSAAYVLLGRQDLAMSSLTRECKYREIERPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTDSIGKAKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYMAKLHFRKLKKATITTQCAWRGKIARRELRKLKMGFLSSPSSASLAAPVMEVVRKVEAKYSALLFEQQLTAYVEKISGIIRDNLKKELSSLLSLYFIPDMQAPRTSKGVARTGRSFAKDSPTDHWQSIIESLNTLLCTLKENFVPPVLTQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKQEAFSQHMALSVLFIEHVISVLSQTPILKGDVDRVEDSHVFDSQTEDGMLQAAIFALTAFFRFLINSSAFLSHFQGLQLLVYLLNISTALSMAMVLCSHGIMNGNMTVGDLVMVNGLLFQLSLPLTFLGSVYRETVQSLVDMKSMFQLLEVALSTLFMISLVHLSGLFYLGLLGITVCSGYSFKKILISEQLDFFFTLSGLHLVISGGAFEVMPSLVSGFGYLV 1637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1260 1637 ProSiteProfiles Dilute domain profile. 777 1060 IPR002710 -
Sto12g1260 1637 MobiDBLite consensus disorder prediction 700 714 - -
Sto12g1260 1637 MobiDBLite consensus disorder prediction 684 723 - -
Sto12g1260 1637 Gene3D - 1141 1244 - -
Sto12g1260 1637 Pfam DIL domain 1367 1423 IPR002710 -
Sto12g1260 1637 ProSiteProfiles Myosin motor domain profile. 395 472 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1260 1637 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1492 1550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto12g1260 1637 SUPERFAMILY ABC transporter transmembrane region 1481 1563 IPR036640 GO:0005524|GO:0016021
Sto12g1260 1637 Gene3D - 406 473 - -
Sto12g1260 1637 ProSiteProfiles IQ motif profile. 1224 1253 IPR000048 GO:0005515
Sto12g1260 1637 Gene3D - 475 528 - -
Sto12g1260 1637 PANTHER MYOSIN-6 1209 1250 - -
Sto12g1260 1637 PANTHER MYOSIN-6 1175 1209 - -
Sto12g1260 1637 PANTHER MYOSIN-6 485 649 - -
Sto12g1260 1637 PANTHER MYOSIN-6 1249 1416 - -
Sto12g1260 1637 PANTHER MYOSIN-6 394 485 - -
Sto12g1260 1637 PANTHER MYOSIN-6 648 991 - -
Sto12g1260 1637 Coils Coil 576 596 - -
Sto12g1260 1637 Pfam Anaphase-promoting complex subunit 1 WD40 beta-propeller domain 110 273 IPR024990 GO:0005680
Sto12g1260 1637 Pfam Myosin head (motor domain) 391 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1260 1637 Coils Coil 523 557 - -
Sto12g1260 1637 Gene3D ABC transporter type 1, transmembrane domain 1458 1565 IPR036640 GO:0005524|GO:0016021
Sto12g1260 1637 ProSiteProfiles IQ motif profile. 500 529 IPR000048 GO:0005515
Sto12g1260 1637 ProSiteProfiles Dilute domain profile. 1262 1486 IPR002710 -
Sto12g1260 1637 PANTHER MYOSIN 1249 1416 - -
Sto12g1260 1637 PANTHER MYOSIN 1209 1250 - -
Sto12g1260 1637 PANTHER MYOSIN 394 485 - -
Sto12g1260 1637 PANTHER MYOSIN 1175 1209 - -
Sto12g1260 1637 PANTHER MYOSIN 648 991 - -
Sto12g1260 1637 PANTHER MYOSIN 485 649 - -
Sto12g1260 1637 SMART iq_5 474 498 IPR000048 GO:0005515
Sto12g1260 1637 SMART iq_5 1223 1245 IPR000048 GO:0005515
Sto12g1260 1637 SMART iq_5 499 521 IPR000048 GO:0005515
Sto12g1260 1637 Coils Coil 643 663 - -
Sto12g1260 1637 SMART DIL_2 1366 1447 IPR002710 -
Sto12g1260 1637 SMART MYSc_2a 153 473 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1260 1637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1157 1253 IPR027417 -
Sto12g1260 1637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 533 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1260 Sto-Chr12 8098474 8114579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1260 421 989 Myosins gene family AT5G43900 55.079 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1260 K10357 - gmx:100786893 711.449