Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1250 atgacgaactacgtggactttgatcccttcctaaggttctcctttttcttctcactAGAAATTTCAGAAATCGCTGATAATAATCCTCAATTGAAGCATCTCTTTCAGGTCTTAATTAGTTCTACTTTCTTCACTATGGCGAAAGAAGGGAAGGCGATAGGGATAGACCTAGGAACGACCTACAGCTGCGTGGGCGTATGGCAAAACGACCGCGTCGAGATCATCCCGAACGACCAGGGCAACCGCACGACGCCGTCCTACGTGGCGTTCACAGACACCGAGAGGCTGATCGGCGACGCGGCGAAGAATCAGGTCGCGATGAATCCTCAGAACACCGTCTTCGACGCGAAGCGTCTCATCGGCAGGCGATTCTCGGACCCGTCCGTGCAAAACGACATGAAGCTCTGGCCGTTCAAGGTCGTCCCGGGCCCAGCGGAGAAGCCCATGATCGTCGTCACGTACAAAGGCGAGGAGAAGAAATTCGCCGCCGAGGAGATCTCGTCAATGGTCCTCACGAAGATGCGAGAAGTCGCGGAACAATTCTTAGGCCAGCCCGTCAAAAACGCCGTCGTAACGGTCCCCGCTTATTTCAACGACTCCCAAAGGCAAGCGACGAAGGACGCAGGGGCAATTTCGGGACTGAATGTCCTTCGAATCATCAACGAACCCACGGCCGCCGCTATAGCGTACGGATTGGACAAGAAAGCTTCTAGAAAAGGCGAGCAGAACGTGCTTATATTCGACCTCGGAGGGGGAACCTTCGATGTCTCGTTATTAACCATCGAAGAAGGGATTTTTGAGGTTAAAGCCACGGCAGGGGATACACATTTGGGAGGTGAAGATTTCGACAATAGAATGGTGAATCATTTTGTTTCTGAGTTCAAACGTAAGAACAAGAAGGACATAAGTGGAAATGCGAGGGCTTTGAGGAGATTAAGGACGGCTTGTGAAAGAGCGAAGAGGACTCTGTCTTCCACAGCACAAACCACAATAGAAATCGATTCCCTCTATGAAGGAATTGACTTCTACGCGACAATTACGAGAGCGAGATTTGAAGAATTGAATATGGATTTGTTCAGGAAGTGTATGGAACCTGTGGAGAAGTGTCTTCGAGATGCTAAGATTGATAAAGGACAGGTTCATGAGGTGGTTCTTGTAGGCGGGTCGACCCGAATACCCAAAGTCCAACAACTTCTGCAGGACTTCTTCAACGGGAAGGAGCTTTGTAAGAGTATAAACCCCGACGAGGCGGTGGCGTACGGCGCGGCGGTGCAAGCCGCCATACTCAGCGGCGAAGGGGACGAGAAAGTTCAAGACTTGCTGCTTCTCGACGTCACTCCATTAAGCCTCGGCCTCGAAACCGCCGGCGGCGTGATGACCGTGTTAATCCCGAGGAACACGACGATCCCCACAAAAAAAGAACAAATCTTTTCCACATATTCCGATAACCAACCCGGGGTTTTGATCCAAGTTTACGAGGGAGAGCGAGCGAGGACGAAAGATAACAACTTGTTGGGGAAATTCGAGCTCACCGGAATCCCGCCGGCGCCGAGAGGGGTGCCTCAGATCAACGTGTGCTTCGACATCGACGCCAACGGAATCCTCAACGTCTCGGCGGAGGACAAAACGGCGGGAGTGAAGAACAAGATCACAATCACGAACGATAAAGGAAGACTAAGCAAGGAAGAGATTGAGAAGATGGTTCAGGATGCAGAGAGGTACAAAGCAGAGGATGAGgatgtgaagaagaaggtggaAGCGAAGAACTCGCTGGAGAATTATGCGTATAACATGAGGAATACGATAAGGGATGAGAAGATTGGAGGGAAGCTAGATGGGGATGAGAAGCAGAAGATAGAAAAGGCAGTGGAGGAAGCTATAGAGTGGTTGGAAGGGAATCAATTGGCTGAAGTGGAGGAGTTTGAGGATAAGCAGAAAGAGTTGGAGGGTATATGTAATCCCATTATAGCTAAGATGTACCAGGGTGGTGGTGCCGGCGCCGGAGGGGATGCCGGAATGGATGATGACATGCCGGCCGGTGGGACAGCCGGGTCGGGTTCTGGAGCTGGACCCAAGATTGAGGAAGTTgactga 2094 0.4924 MTNYVDFDPFLRFSFFFSLEISEIADNNPQLKHLFQVLISSTFFTMAKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQNDMKLWPFKVVPGPAEKPMIVVTYKGEEKKFAAEEISSMVLTKMREVAEQFLGQPVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKGQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVQDAERYKAEDEDVKKKVEAKNSLENYAYNMRNTIRDEKIGGKLDGDEKQKIEKAVEEAIEWLEGNQLAEVEEFEDKQKELEGICNPIIAKMYQGGGAGAGGDAGMDDDMPAGGTAGSGSGAGPKIEEVD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1250 697 SUPERFAMILY Actin-like ATPase domain 51 234 IPR043129 -
Sto12g1250 697 Coils Coil 564 584 - -
Sto12g1250 697 ProSitePatterns Heat shock hsp70 proteins family signature 2. 246 259 IPR018181 -
Sto12g1250 697 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 434 587 IPR029047 -
Sto12g1250 697 Gene3D - 235 409 - -
Sto12g1250 697 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 586 667 IPR029048 -
Sto12g1250 697 Pfam Hsp70 protein 52 661 IPR013126 GO:0005524|GO:0140662
Sto12g1250 697 PANTHER HEAT SHOCK PROTEIN 70KDA 47 668 IPR013126 GO:0005524|GO:0140662
Sto12g1250 697 Gene3D - 588 662 IPR029048 -
Sto12g1250 697 SUPERFAMILY Actin-like ATPase domain 239 431 IPR043129 -
Sto12g1250 697 ProSitePatterns Heat shock hsp70 proteins family signature 3. 383 397 IPR018181 -
Sto12g1250 697 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 435 592 IPR029047 -
Sto12g1250 697 Gene3D - 53 427 - -
Sto12g1250 697 Gene3D - 114 169 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 51 64 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 79 91 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 101 109 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 189 209 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 252 262 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 380 396 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 412 432 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 439 458 - -
Sto12g1250 697 PRINTS 70kDa heat shock protein signature 520 536 - -
Sto12g1250 697 MobiDBLite consensus disorder prediction 663 697 - -
Sto12g1250 697 ProSitePatterns Heat shock hsp70 proteins family signature 1. 55 62 IPR018181 -
Sto12g1250 697 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 47 668 - -
Sto12g1250 697 Gene3D Actin; Chain A, domain 4 278 361 - -
Sto12g1250 697 CDD HSPA1-2_6-8-like_NBD 52 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1250 Sto-Chr12 8018740 8022762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1250 49 697 Calmodulin-binding Proteins AT3G12580 87.982 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1250 K03283 - gmx:100782173 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1250 12 8018740 8022762 Sto12g1250 12 8018740 8022762 ECH