Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto12g1246 | ATGGCGAATGGGTGTGAAATGTGCTGTGAGATTCTGATAGCCATCTTGCTGCCTCCAATAGGAGTTTGCTTCAGGCATGGTTGCTGCACTGTAGAATTCATGATATGCTTACTGTTGACAATACTAGGGTACATTCCAGGAATAATCTATGCCCTCTATGCCATCGTTTTCGTTGATCGTGATCAGTACTTTGATGAAGCAAGACGTCCTCTCTATGCACAGAATTAA | 228 | 0.4298 | MANGCEMCCEILIAILLPPIGVCFRHGCCTVEFMICLLLTILGYIPGIIYALYAIVFVDRDQYFDEARRPLYAQN | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto12g1246 | 75 | Pfam | Proteolipid membrane potential modulator | 8 | 56 | IPR000612 | GO:0016021 | |
| Sto12g1246 | 75 | ProSitePatterns | Uncharacterized protein family UPF0057 signature. | 12 | 27 | IPR000612 | GO:0016021 | |
| Sto12g1246 | 75 | PANTHER | BNAA03G50460D PROTEIN | 1 | 73 | - | - | |
| Sto12g1246 | 75 | PANTHER | HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED | 1 | 73 | IPR000612 | GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto12g1246 | Sto-Chr12 | 7997347 | 7998414 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto12g1246 | 1 | 75 | RCI2 Gene Family | AT4G28088 | 81.579 | 1.64e-42 | 130 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto12g1246 | - | - | gmx:100306426 | 142.895 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Sto12g1246 | 12 | 7997347 | 7998414 | Sto12g1246 | 12 | 7997347 | 7998414 | ECH |