Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1244 ATGGTAGTGGTCTGGTGGTCATGCTGCATCATGACTCACTGTGGGGCTACTCAAATTCTGTGGTTGTGGCCGGGTTGTTCATCAGTGGCATATGGAGCGTCAGAGGAAATTGGGCCATTTCGGATAAACAAAACTGGCTCTTCTCTGTATCTAAACAAATATGCATGGAACAGAGAGGCAAATATCCTCTTCCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTACACAAATACTAGCTCGGACCTCAAAACTTCTGGGGACAAAAGGACtgCTCAGGATGCTCTAATTTTTCTGATTAGATGGATGTCAAGGTTTCCACAATATAAATATAGAGAGTTTTACATCGCTGGGGAGAGCTATGCAGGGCATTACATTCCCCAGTTGGCTAAGAAAATATATGATTACAACAAAGCAAATCCCCATATCATTAATCTTAAAGGGTTCATTGTTGGAAATGCTTTGACAGATGACTACTATGATGGGGTTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATCTTTCATACAAATCAATCCTCAAATACTGCAATTTCACATCAGAAAAAACTTCTGAAAAATGTGATGATGCAGTGAGTTATGTGTTTAACCACgaattgggaaaaattgatCAATACAGTATTTATACCCCGTCATGCCCAACATTGCACAACAATACTATCCGGTATATACGATTCAAGAGTAAAATTTTACATAGGATTTCAGGGTATGATCCATGTACTGAAGACTATGCAGAGAAATATTATAATCGTCCTGATGTGCAGAAAGCCATGCATGCAAATGTTACAAACATTCCTTACAAATGGACTGCTTGCAGTAATTTGCTCTTAAAAAACTGGAAGGATTCTGCTGTTTCTGTACTGCCAATATACAAAGAGTTAACTGCGGCTGGTTTCAGAATCTGGGTTTTCAGTGGGGACACAGACGCTGTGGTTCCAGTGACAGCCACCAGATTTGCCCTCAACCATCTCAACCTCACTATTAAAACTCGTTGGTATCCATGGTACTCTGGGGGACAGGTAGGTGGATGGACAGAGGTGTACGATGGACTAACCTTTGCAACAGTAAGAGGAGCTGGACATGAAGTGCCATTGTTGCAGCCAAAGCGAGCATTCATACTCTTCAAATCTTTCTTGGCAGGAGAGGAGCTTCCAAGATCTTGA 1191 0.4114 MVVVWWSCCIMTHCGATQILWLWPGCSSVAYGASEEIGPFRINKTGSSLYLNKYAWNREANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWMSRFPQYKYREFYIAGESYAGHYIPQLAKKIYDYNKANPHIINLKGFIVGNALTDDYYDGVGTVTYWWSHSMISDLSYKSILKYCNFTSEKTSEKCDDAVSYVFNHELGKIDQYSIYTPSCPTLHNNTIRYIRFKSKILHRISGYDPCTEDYAEKYYNRPDVQKAMHANVTNIPYKWTACSNLLLKNWKDSAVSVLPIYKELTAAGFRIWVFSGDTDAVVPVTATRFALNHLNLTIKTRWYPWYSGGQVGGWTEVYDGLTFATVRGAGHEVPLLQPKRAFILFKSFLAGEELPRS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1244 396 Pfam Serine carboxypeptidase 19 389 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 Gene3D - 249 285 - -
Sto12g1244 396 ProSitePatterns Serine carboxypeptidases, histidine active site. 360 377 IPR033124 GO:0004185
Sto12g1244 396 Gene3D alpha/beta hydrolase 15 224 IPR029058 -
Sto12g1244 396 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 395 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 SUPERFAMILY alpha/beta-Hydrolases 24 392 IPR029058 -
Sto12g1244 396 ProSitePatterns Serine carboxypeptidases, serine active site. 115 122 IPR018202 GO:0004185
Sto12g1244 396 PANTHER SERINE CARBOXYPEPTIDASE 24 19 395 - -
Sto12g1244 396 PRINTS Carboxypeptidase C serine protease (S10) family signature 52 64 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 PRINTS Carboxypeptidase C serine protease (S10) family signature 65 75 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 PRINTS Carboxypeptidase C serine protease (S10) family signature 101 126 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 PRINTS Carboxypeptidase C serine protease (S10) family signature 360 373 IPR001563 GO:0004185|GO:0006508
Sto12g1244 396 Gene3D - 296 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1244 Sto-Chr12 7982667 7985951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1244 254 393 Calmodulin-binding Proteins AT2G22960 30.496 1.81e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1244 K16297 - gmx:100785391 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1244 12 7982667 7985951 Sto12g1244 12 7982667 7985951 ECH