Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1238 ATGTTTGACTGTGGTTACAAGGCACAATACATGAGTGGCCAGCGGGAAAAATTTATGAGGTTGGATGACTTGGACTCTAGACTAGCTTCACCTTCTAATGCTGGAGTTAAAAACTGTGGATTTAGTACTGTTAAATTAAGCCATGGTGGTCATGCAAGCAGTGGAACCACTGGATCTTTTAAAAGAGGAATGAGAAAGGGATCCGAAGGACTGAAGTCAATTGGCCGATCACTTAGATTTGGGGTATCTAGGGCAGTCTTCCCAGAAGACCTTAAAGTATCAGAAAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTTATGGAATAAGCTTTTTGTTATCTCATGCATTTTGGCTGTCTCCGTTGATCCATTGTTTTTTTACCTCCCTGTCATCAATGATTCATTAAAATGTCTTAGTATAGATCGAAAGTTGGCAATCATAGTCACCACTCTGAGAACAGTTATTGATGCTTTTTATCTTATACACATGGCTCTCCAATTCCGTACTGCATACATAGCTCCATCTTCTCGTGTCTTTGGACGGGGTGAGCTTGTGATAGATCCATCACAGATAGCCAAGCGATACATGCGGCGATacttttttgttgattttctaTCTGTGTTGCCCTTGCCACAGATTATAGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTGCTGGCAACAAAGCAGGCCTTGCTGTTCATTATCTTGCTTCAGTATGTTCCTAGATTTCTGCGGATGGTACCATTGACTTCGGAACTTAAGAGAACAGCTGGCGTCTTTGCTGAAACTGCCTGGGCTGGTGCTGCATATTATCTGCTATTATACATGCTGGCTAGTCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTATTGAACGCAATGACTCATGCTGGCAGACAGCTTGTAGTGAAAATGGGTGCAATAAAAATTTCTTGTATTGTGGCATCCAGCACATGGAAGATTATAGTGCCTGGCAGAATAGAAGCGATATTCTCAAGTCAAAGTGCTCTGCAGATGATGAAAATCCACCTTTTGATTATGGAATTTTTTTACAAGCATTTAAATCTGGCATTGTTTCATCTAAGAAGTTTATCTCCAAATACTGTTACTGTTTATGGTGGGGCCTCCAGAATTTgagTACACTTGGTCAGGGGCTTCAAACCAGCACCTATCCTGGGGAGGTTATATTTTCAATAGCGCTAGCCATTTTTGGTCTTATCCTCTTTGCGCTTCTGATCGGTAACATGCAGACGTACCTTCAGTCTCTTACCATCAGGCTTGAGGAAATGAGAGTGAAAAGACGTGATTCTGAACAGTGGATGCATCATCGCTTGCTCCCCCACGAGCTTAGAGAGCGTGTTAGGCGCTATGATCAATATAAGTGGTTGGCAACACGTGGTGTTGATGAAGAAAATTTGGTTCAGAGTCTACCAAAGGATCTTAGAAGAGATATTAAGCGTCATCTTTGTCTGGCTTTAGTGAGAAGGGTTCCACTCTTCGAGAGTATGGATGAGAGATTGCTTGATGCAATTTGTGAGAGACTGAAACCATGTTTATTTACGGAGAATACATACATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTCTTCATCATACGCGGTCGCCTTGAGAGTGTTACCACTGATGGTGGGAGAAGTGGATTTTTCAACCGCAGTATCCTGAAAGAGGCTGAGTTCTGTGGAGAAGAGCTTCTAACCTGGGCACTGGATCCCAAATCTGGCTCCAACCTTCCTTCTTCTACCAGAACAGTTAAGGCATTAACAGAAGTTGAGGCTTTTGCTTTGATTGCTGAAGAATTGAAATTTGTTGCAAGTCAATTTAGGCGCCTCCACAGTAGACAGGTTCAACACACCTTCCGCTTCTACTCACAACAATGGCGAACTTGGGCTGCATGCTTTATTCAAGCAGCCTGGCGTCGGTATTCTAAGAGGAAGATCATGGAGCTTCGTCGAAAAGAGGAATCTGAGGAGCAAGAAGCAACTCGCAACAGTGTCGTTGGTGGTTCATACAGCCTCGGTGCCACCCTCTTAGCCTCGAGATTTGCTGCCAATGCTCTTCGTGGTATACATCGTAATCGGAATGCCAAGACTGCCAGGGAGCTAGTGAAACTACAAAAACCTCCAGAACCTGACTTTACTGCGGATGCAGACTAA 2193 0.4286 MFDCGYKAQYMSGQREKFMRLDDLDSRLASPSNAGVKNCGFSTVKLSHGGHASSGTTGSFKRGMRKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSLKCLSIDRKLAIIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMRRYFFVDFLSVLPLPQIIVWRFLQRSKGSDVLATKQALLFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQTACSENGCNKNFLYCGIQHMEDYSAWQNRSDILKSKCSADDENPPFDYGIFLQAFKSGIVSSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSILKEAEFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIMELRRKEESEEQEATRNSVVGGSYSLGATLLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADAD 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1238 730 CDD CAP_ED 504 635 IPR000595 -
Sto12g1238 730 Gene3D - 111 429 - -
Sto12g1238 730 Gene3D Jelly Rolls 502 622 IPR014710 -
Sto12g1238 730 ProSiteProfiles cAMP/cGMP binding motif profile. 504 588 IPR000595 -
Sto12g1238 730 Pfam Ion transport protein 108 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto12g1238 730 SUPERFAMILY cAMP-binding domain-like 433 623 IPR018490 -
Sto12g1238 730 SUPERFAMILY Voltage-gated potassium channels 100 426 - -
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 373 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 399 410 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 417 426 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 PRINTS EAG/ELK/ERG potassium channel family signature 467 474 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1238 730 ProSiteProfiles IQ motif profile. 640 669 IPR000048 GO:0005515
Sto12g1238 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 727 - -
Sto12g1238 730 Gene3D Helix hairpin bin 432 495 - -
Sto12g1238 730 Pfam Cyclic nucleotide-binding domain 525 614 IPR000595 -
Sto12g1238 730 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 13 727 - -
Sto12g1238 730 SMART cnmp_10 504 635 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1238 Sto-Chr12 7939013 7946412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1238 1 728 Ion Channels AT2G23980 76.203 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1238 K05391 - gmx:100820202 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1238 12 7939013 7946412 Sto12g1238 12 7939013 7946412 ECH