Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1233 ATGGATGGTGAAGCTGAGAGTAAGGGAATGGACCGGAAAAAATTTTCTGGTTGTAAAACCACATCTGCTGTTTCTGTAGTGAGGACATCTGCATCTGACGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACTGGTTCTCGAAGCTATTACAGGTGTAGTCATTCAAACTGTTGTGCAAAGAAGATTGAATTTCGTGATCATTTGAACCATGTGATAgagattatttataaaaatcaaCACAGCCATGAACCTTTATGGAAAACTAACTCCAGTGGGGAAATTAAGTTAATGCCATCCAATGAACCTACTGTAGAAACAAGTGTTCCAGAACAACCCACTAGAGTGCTCAATGACTCAGATTCATCTCCTCCAAAACGACCTATAAAAGAAGTACTGAGCAGTACTGATAAGAAACGGCAAAAACCATCTGGTCTTAGTGAGAATGCAGAGGATGTGGGGATATCAGGTGATGGCTACCGATGGCGCAAGTATGGACAGAAAATGGTCAAGGGGAATCCAAATCCGAGAAATTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGGAAGCAAATTGAGACTGCTGCAGATAACTCAAATGCTGCCATCATAACATATAAGGGAGTACATGACCATGACATTCCTGTGCCTAAGAAACAGCACGGCCGACCAAGTGCTCCTCTTATGGCCGCTGCAGCCCCTGCTTCAAATGATTTGCACCTCAAGAATACTGATGCATTACAAAACCAAAATTCTTCTCCTCAGTCATCTGTGGACACAGAAGAAGAATTAATGAGAGAAGCCTTGGACCTTGGGGGTGAGAAAGCAATTGAGTCAGCTCGAACCCTTCTGAGCATCGCTGATGGATTGTTAAGAGTTTCAAGAACTCACTGGGGGGTGACTGGTGAGACAAGGCCTGTGCTTGGACCCAATGGGAACAAGACCGGGTCATTGAGTTCAAGAAAATCCACTTCAAAGCCACTGAGGAAGGCAGATAAACTGAGGGAAGAGGTTGCATCAGCCAAAGAGAAGAAATCCCATCAGTTGTCTCCAACTGTTACTTCCTCTCCTCAGTCACATTCTGTTAGTGTTCCTTCAGTACTCCGCAGGCATGAGCAGCTATTGCATTCTAATTTGTCTCTCAATGCTTCATGTTCTTCTGATGCCTCTACAGATTCATTCCATAGTAGAGCATCTACAGGCAGATTGACTCGATCGACTAGCCTCATTAGCAGAAGGAAGCCGTATGTGTCAAAGCCAAGAAGTGTTGCTTCTGATGGTGCTTTAGAATCTCCACCTAATGGTTCACAATCCAAGAAGAGGTGTACCTGGGTCACTCCAAATACCGAACCTTGTTACACTACTTTCCACGACGAGGAATGGGGAGTTCCAGTACATGATGACAAGAAACTATTTGAACTTCTTGTACTTTCAAGTTCTCTTGCTGAACTCACTTGGCCAGCCATTCTAAGCAAAAGGCATATTTTCAGGGAAGTTTTCGCAGGCTTTGATCCAGTTGCTGTCTCAAAATTGACTGAAAAGAAGTTATTGGCACTAGGAACCACTGCAAGTTCTCTACTTTCAGAACTTAAACTGCGTGGTATAGTTGAGAACGCACGTCAAACATCAAAGGTCATAGATGAGTTTGGATCGTTTGACAAGTACTTATGGAGTTTTGTGAACCACAAGCCTATAGTTAGCAGATTCCGGTATCCTCGACAGGTTCCTGTAAAAACACCAAAAGCAGAAGTTATTAGTAAAGACCTGGTGAGAAGAGGATTCCGTGGCGTGGGCCCCACCGTCGTGTACTCCTTCATGCAGGTTGCTGGGTTAACAAATGACCATCTCATCAGTTGCTTCAGATTCCAGGAGTGTATAGCTGCAGCAGAAGGTAAGGAAGAGAATGGCATGAAGGACAATGTTCATGAAGAAAAGGAGAGTGATAATGTGATGGAGTCAGATCTGTCCATTGCCATTGATGAATTGAGTTTCTCCTCAGAATGA 2019 0.4368 MDGEAESKGMDRKKFSGCKTTSAVSVVRTSASDGYNWRKYGQKQVKSPTGSRSYYRCSHSNCCAKKIEFRDHLNHVIEIIYKNQHSHEPLWKTNSSGEIKLMPSNEPTVETSVPEQPTRVLNDSDSSPPKRPIKEVLSSTDKKRQKPSGLSENAEDVGISGDGYRWRKYGQKMVKGNPNPRNYYRCTSAGCPVRKQIETAADNSNAAIITYKGVHDHDIPVPKKQHGRPSAPLMAAAAPASNDLHLKNTDALQNQNSSPQSSVDTEEELMREALDLGGEKAIESARTLLSIADGLLRVSRTHWGVTGETRPVLGPNGNKTGSLSSRKSTSKPLRKADKLREEVASAKEKKSHQLSPTVTSSPQSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLTRSTSLISRRKPYVSKPRSVASDGALESPPNGSQSKKRCTWVTPNTEPCYTTFHDEEWGVPVHDDKKLFELLVLSSSLAELTWPAILSKRHIFREVFAGFDPVAVSKLTEKKLLALGTTASSLLSELKLRGIVENARQTSKVIDEFGSFDKYLWSFVNHKPIVSRFRYPRQVPVKTPKAEVISKDLVRRGFRGVGPTVVYSFMQVAGLTNDHLISCFRFQECIAAAEGKEENGMKDNVHEEKESDNVMESDLSIAIDELSFSSE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1233 672 MobiDBLite consensus disorder prediction 330 349 - -
Sto12g1233 672 SUPERFAMILY DNA-glycosylase 445 631 IPR011257 GO:0003824|GO:0006281
Sto12g1233 672 MobiDBLite consensus disorder prediction 313 329 - -
Sto12g1233 672 MobiDBLite consensus disorder prediction 306 371 - -
Sto12g1233 672 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 SMART WRKY_cls 31 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 MobiDBLite consensus disorder prediction 350 371 - -
Sto12g1233 672 Gene3D WRKY domain 148 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 Gene3D WRKY domain 17 90 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 Gene3D Hypothetical protein; domain 2 444 627 - -
Sto12g1233 672 PANTHER OS04G0501200 PROTEIN 307 672 - -
Sto12g1233 672 MobiDBLite consensus disorder prediction 395 418 - -
Sto12g1233 672 Pfam Methyladenine glycosylase 453 626 IPR005019 GO:0006284|GO:0008725
Sto12g1233 672 MobiDBLite consensus disorder prediction 395 447 - -
Sto12g1233 672 SUPERFAMILY WRKY DNA-binding domain 29 88 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 MobiDBLite consensus disorder prediction 97 125 - -
Sto12g1233 672 MobiDBLite consensus disorder prediction 97 157 - -
Sto12g1233 672 ProSiteProfiles WRKY domain profile. 32 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 Pfam WRKY DNA -binding domain 33 88 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 Pfam WRKY DNA -binding domain 162 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1233 672 MobiDBLite consensus disorder prediction 135 150 - -
Sto12g1233 672 PANTHER GMP SYNTHASE [GLUTAMINE-HYDROLYZING] ISOFORM X1-RELATED 307 672 - -
Sto12g1233 672 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1233 Sto-Chr12 7902642 7913053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1233 22 292 WRKY Transcription Factor Family AT4G30935 52.614 9.82e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto12g1233 Adenine_glyco 4.1e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1233 K01246 - gmx:100801026 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1233 12 7902642 7913053 Sto12g1233 12 7902642 7913053 ECH