Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1231 ATGGGTTTGGGAGCATTTGGTTCCATTGTAGTTCTGACATTTTTCTTCAAGCATTTGGCATGCCAGCAACCAAACAGTGATGAATTCCTTGTGTCTGACTTCTTCAAGAAGATGggtttatcatcatcatcttcctctcaTGCCTTCAACTTCTCTGGTTCTGTTTGTTCATGGCAAGGGGTTTTCTGTGATGCCAATAAAGAACATGTTCTTGAGCTAATGGCTTCTGGTATGGGCCTCTCTGGCCTTATTCCTGATAACACCATTGGTAAACTCATCAAGCTTCAATCTTTAGATCTCAGCAACAACAAAATCACAGGCTTGCCTTCTGATTTCTGGAGTTTAAGCTCTCTCAAGATTCTCAATCTCTCCTCCAATCAGATTTCAGGTTCACTAAACAGCAACTTTGGCAACTTTGGTCTCCTTGAAACCTTTGACTTATCCAGAAACAACTTTTCTGGGACAATTCCTGAAGATGTTAGTTCTCTTTTGAGTTTAAGGTTCCTCAAACTTGACCAGAATACGTTTGAGCAGAACATACCTTCAGGGATTCTCAATTGTCAGTCTCTAGTTTCACTTGATCTTTCATCAAATCACCTTAATGGGACTCTTCCTGATGGTTTTGGAGCTTCTTTTCCTAATCTCAAAAGCTTGAATCTTGCAGGGAATAATATTCGTGGTCGTGATTCGGATTTTTCAGAGTTGAAATCCATTACTATTATTAACATTTCTGGAAATTCCTTTCAGGGTTCTGTTCTGGGAATGTTTAAGGAACAATTGGAGGTCATTGATCTTAGCAGGAACCAGTTTCAAGGTCACATTTCTCAGGTAAAAATCAACTCTACTGCATACAATTGGTCTCGTTTGGTTTATCTGGATTTGTCTGAGAATAGGCTCAGTGGGGAAATTTTCCAGAATTTGAATGAGGCCAAGAATCTTAAACACCTCAATCTTGCACACAATAGATTTTCAAGGCAGAAATTTCCACAAATTGAGAGGCTTTCAGGGTTGAAATATCTGAACTTGTCCCAAACTAATCTGGTTGGTCACATTCCTGCTGGAATATCTCAGTTGAGTAATTTGAAAGCACTTGATGTTTCTGCGAATCATCTTACAGGGAAAGTTCCATTTCTGAGGAGTAAAAACCTCCAAATTCTTGACCTTTCGAACAACAATTTGAGTGGAGAAATCCCTCCATTTGTGCTGGAGCAACTCCCATGGATGGAGAAATATAACTTCTCCTACAATAACTTCACCTTCTGTTCTTTGGGAATCAATCCCAACATCCTTCAAACGGCATTTTTCGGATCATCAAACAGTTGCCCAATTGCTGCAAACCCCAGCCTTTTCAAAAGAAGAGCCACTGAACACCAAGGAATGAAGATAGCTCTAGCACTGACCCTCTCAATGATCTGCCTACTTTCTGGGCTTTTGTTTATAGCATTTGGTTGCAGAAGGAAAACCAATTTGTGGGAAGTTAAGCAAACTTCTTCATACAGAGAAGAGAGGAACATTTCGGGTCCCTTCTCATTTCAGACAGATTCAACTACATGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTGATATTTGAGAAGCCATTGCTGAACATTACATTTGCAGATCTCTTGTCCTCAACCTCAAACTTCGACCGGGGTACACTTTTGGCTGAAGGGAAATTCGGGCCAGTTTATAGAGGTTTCGTACCTGGTGGCAACATTCTTGTAGCAGTTAAAGTTTTGGTTGTTGGGTCTACATTGACAGATCAAGAAGCAGCAAAAGAGCTTGAATATCTTGGTAGAATCAAGCACCCAAATCTTGTTCCTTTAACTGGATATTGCTTTGCTGGGGATCAAAGGATTGTCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTGCTTCATGACTTGCCTCTTGGTGTACAAAGAACAGATGATTGGAGCACAGACACAtgggaagaagaaaaagtagatgatgatgatgataatgggaTTCATCAAAATGCTGCCTCTGAGGGACTATTGCTCACATCTTGGACATTTCGCCACAAAATCGCCCTCGGCACTGCCCGAGCACTGGCATTTCTGCATCATGGATGCTCACCTCCAATCATCCACAGAGATGTTAAAGCTAGCAGCGTCTATTTGGACTATAACTTAGAGCCAAGGTTATCAGATTTTGGTTTGGCTAAGATTTTTGGAAGTGGATTAGATGAAGAAATTGCACATGGATCTCCTGGCTATGTTCCACCAGAGTTTTCTCAACCTGAATATGACTCCCCAACACCAAAATCTGATGTTTACTGTTTTGGGGTTGTCCTATTTGAGCTAATTACAGGAAAGAAACCAGTTGGGGATGATTATCCTGAAGAGAAAGATGCAACATTGGTAAGCTGGGTTAGAGGACTTGTGAGAAAGAACCTATCTTCAAGAGCTATTGATCCAAAACTTAGTGATATAGGAATTGGTACACAAATGGAAGAAGCCCTTAAGATTGGATATTTGTGTACTGCTGATCTTCCTTCTAAACGTCCTAGTATGCAGCAGATAGTGGGACTTCTTAAGGATATTGAGCCTACTGCATATCCATGCTTggtagtagaagaagaagaaagcttTGATGAATATACACACCATGAATTTGTTACTGCTTTTCTTCTCTTTGTCAAACTTGAAAACTCATTCAGAGAAACAAGTTGA 2712 0.392 MGLGAFGSIVVLTFFFKHLACQQPNSDEFLVSDFFKKMGLSSSSSSHAFNFSGSVCSWQGVFCDANKEHVLELMASGMGLSGLIPDNTIGKLIKLQSLDLSNNKITGLPSDFWSLSSLKILNLSSNQISGSLNSNFGNFGLLETFDLSRNNFSGTIPEDVSSLLSLRFLKLDQNTFEQNIPSGILNCQSLVSLDLSSNHLNGTLPDGFGASFPNLKSLNLAGNNIRGRDSDFSELKSITIINISGNSFQGSVLGMFKEQLEVIDLSRNQFQGHISQVKINSTAYNWSRLVYLDLSENRLSGEIFQNLNEAKNLKHLNLAHNRFSRQKFPQIERLSGLKYLNLSQTNLVGHIPAGISQLSNLKALDVSANHLTGKVPFLRSKNLQILDLSNNNLSGEIPPFVLEQLPWMEKYNFSYNNFTFCSLGINPNILQTAFFGSSNSCPIAANPSLFKRRATEHQGMKIALALTLSMICLLSGLLFIAFGCRRKTNLWEVKQTSSYREERNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSSTSNFDRGTLLAEGKFGPVYRGFVPGGNILVAVKVLVVGSTLTDQEAAKELEYLGRIKHPNLVPLTGYCFAGDQRIVIYDYMENGNLQNLLHDLPLGVQRTDDWSTDTWEEEKVDDDDDNGIHQNAASEGLLLTSWTFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSGLDEEIAHGSPGYVPPEFSQPEYDSPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKDATLVSWVRGLVRKNLSSRAIDPKLSDIGIGTQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPTAYPCLVVEEEESFDEYTHHEFVTAFLLFVKLENSFRETS 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1231 903 Gene3D Ribonuclease Inhibitor 277 444 IPR032675 -
Sto12g1231 903 Gene3D Transferase(Phosphotransferase) domain 1 666 874 - -
Sto12g1231 903 Pfam Leucine rich repeat 84 128 IPR001611 GO:0005515
Sto12g1231 903 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Sto12g1231 903 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Sto12g1231 903 ProSiteProfiles Leucine-rich repeat profile. 382 404 IPR001611 GO:0005515
Sto12g1231 903 Pfam Protein kinase domain 556 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1231 903 ProSiteProfiles Protein kinase domain profile. 552 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1231 903 Gene3D Ribonuclease Inhibitor 32 180 IPR032675 -
Sto12g1231 903 Gene3D Ribonuclease Inhibitor 181 276 IPR032675 -
Sto12g1231 903 SUPERFAMILY L domain-like 50 427 - -
Sto12g1231 903 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Sto12g1231 903 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 863 - -
Sto12g1231 903 PRINTS Leucine-rich repeat signature 95 108 - -
Sto12g1231 903 PRINTS Leucine-rich repeat signature 115 128 - -
Sto12g1231 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 863 - -
Sto12g1231 903 Pfam Leucine Rich Repeat 382 399 IPR001611 GO:0005515
Sto12g1231 903 SUPERFAMILY Protein kinase-like (PK-like) 543 864 IPR011009 -
Sto12g1231 903 SMART LRR_typ_2 334 358 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 115 138 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 212 235 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 188 211 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 381 404 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 92 114 IPR003591 -
Sto12g1231 903 SMART LRR_typ_2 163 187 IPR003591 -
Sto12g1231 903 Gene3D Phosphorylase Kinase; domain 1 512 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1231 Sto-Chr12 7890305 7893419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1231 50 861 Receptor kinase-like Gene Family AT5G07280 31.340 1.44e-110 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Sto12g1231 Pkinase 5.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1231 - - cpap:110811205 1322.38