Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1223 ATGTCAGGAGAAGAAGCTGTAGCACCTGCTGAGGCTTCAGCACCCCTTGGTGAGACCTTGGACATCATGACAGCCTTACAGCTTGTGCTAAGGAAGTCACTAGCTCATGGTGGCCTTGTACGAGGGCTCCACGAATGTGCTAAGATGATTGAGAAGCATGCAGCACATCTCTGTGTGTTAGCTGAGGACTGTGACCAGCCAGATTATGTTAAACTGGTCAAGGCACTCTGTGCTGACCACAATATCAAGTTGATGACAGTTCCTGGTGCTAAAACACTTGGTGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGCAAAGCAAGGAAAGTAGTTGGTTGCTCTTGCGTTGTTGTGAAGGACTTTGGAGAGGAATCACCTGCTTTGGATGTTGTTCAGCAGTATATCAAGTCCCAATAA 420 0.4738 MSGEEAVAPAEASAPLGETLDIMTALQLVLRKSLAHGGLVRGLHECAKMIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNIKLMTVPGAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDVVQQYIKSQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1223 139 PRINTS Ribosomal protein S12E family signature 29 42 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sto12g1223 139 PRINTS Ribosomal protein S12E family signature 43 59 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sto12g1223 139 PRINTS Ribosomal protein S12E family signature 84 105 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sto12g1223 139 PRINTS Ribosomal protein S12E family signature 109 122 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sto12g1223 139 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 25 118 IPR004038 -
Sto12g1223 139 SUPERFAMILY L30e-like 20 138 IPR029064 -
Sto12g1223 139 Gene3D - 4 139 IPR029064 -
Sto12g1223 139 PANTHER 40S RIBOSOMAL PROTEIN S12 1 138 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sto12g1223 139 PANTHER 40S RIBOSOMAL PROTEIN S12 1 138 - -
Sto12g1223 139 ProSitePatterns Ribosomal protein S12e signature. 25 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1223 18 139 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 75.410 7.29e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1223 K02951 - zju:107426723 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1223 12 7779311 7780565 Sto12g1223 12 7779311 7780565 ECH