Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1181 ATGTGTGTGCAGGAGGCAGACCAAGTTGGGCAAGTTATGGAGAACCCAGATAATAGAACCAAGCCATGGCCTCTGCATTGTGAGCTCTTGCATACCCACATGGAAAACTGGCAAAAGGACCCTCCTTTAAGACCCTCCACTGGTGGAAATTCACTTCCTttccccatTCAGCTGGAAAGCATATGTGAGGACACAGTGATTGCAGACAGGAAACAGAACCAGATGAATTTTGTGCCTTCTTTGAGATCTGGAGAGTGGTCAGATATTGGACGTCGCCCTTCCATGGAAGATACCCACATCTGCATTGGAGACTTGAAAAAGAAGTTTGGCTACAATGTAGTCAGTGAGGAAGCTATTTCCTTTTATGGGGTATTTGATGGACACGGAGGGAAAAGTGCTGCACTATTTGTCCGCGATCATCTGCCGAGAGTTATAATTGAGGATGCAGACTTTCCTTTGGAGCTGGAGAAGGTGGTCACAAGGTCATTTTTGCAGACGGATGCTGCATTTGCAGAGACATGTGCACTTGAGTCTTCCTTGTCCTCTGGTACAACTGCATTAACTGCAATTATCTTTGGGAGGTCTTTACTTGTGGCGAATGCTGGAGACTGCAGGGCTGTTTTGTCCCGCCGTGGAGCGGCAATAGAAATGTCCAAAGATCACAGGCCCTTCTGCATCAAAGAAAGGAAGCGAATCGAGTCGCTGGGTGGATTTGTCGATGATGGTTATCTGAATGGCCAGTTAGGTGTCACACGGGCGCTAGGCAACTGGCATCTGGAAGGCATGAAGGAGATGAGTGGAAGAGGAGGACCATTAACTGCTGAGCCGGAACTCAAACTGATGACACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGAATCTGGGATGTTTTCACCAGCCAGAATGCAGTAGATTTCGCCAGAAGGAGGCTTCAAGAGCATAATGATGTGAAACTGTGCTGCAAGGAGATAGTGGAGGAAGCCATAAAGAGAGAATCATCAGATAACTTAACAGTAGTGATGGTGTGTTTTCACTCAGAAGCACCACCACCTGTGGTGGTAGAGAGGGCAAGAGTGAGGAGAAGCATATCTGCTGAGGGACTACAGAATCTCAAATGCTGGCTGGAAGGATAG 1143 0.4681 MCVQEADQVGQVMENPDNRTKPWPLHCELLHTHMENWQKDPPLRPSTGGNSLPFPIQLESICEDTVIADRKQNQMNFVPSLRSGEWSDIGRRPSMEDTHICIGDLKKKFGYNVVSEEAISFYGVFDGHGGKSAALFVRDHLPRVIIEDADFPLELEKVVTRSFLQTDAAFAETCALESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGAAIEMSKDHRPFCIKERKRIESLGGFVDDGYLNGQLGVTRALGNWHLEGMKEMSGRGGPLTAEPELKLMTLTKEDEFLIIGSDGIWDVFTSQNAVDFARRRLQEHNDVKLCCKEIVEEAIKRESSDNLTVVMVCFHSEAPPPVVVERARVRRSISAEGLQNLKCWLEG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1181 380 MobiDBLite consensus disorder prediction 1 20 - -
Sto12g1181 380 CDD PP2Cc 82 347 IPR001932 -
Sto12g1181 380 SUPERFAMILY PP2C-like 73 348 IPR036457 -
Sto12g1181 380 Pfam Protein phosphatase 2C 90 339 IPR001932 -
Sto12g1181 380 SMART PP2C_4 72 345 IPR001932 -
Sto12g1181 380 ProSiteProfiles PPM-type phosphatase domain profile. 82 347 IPR001932 -
Sto12g1181 380 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 368 - -
Sto12g1181 380 PANTHER PROTEIN PHOSPHATASE 2C 1 368 IPR015655 GO:0004722|GO:0006470
Sto12g1181 380 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Sto12g1181 380 Gene3D - 64 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1181 Sto-Chr12 7520337 7524472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1181 71 380 PP2C-type Phosphatase Gene Family AT2G25620 61.538 2.45e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Sto12g1181 PP2C 2.4e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1181 K14803 - gmx:100782648 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1181 12 7520337 7524472 Sto12g1181 12 7520337 7524472 ECH