Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1174 ATGGCCACAGCTGCTTCTCCTTTCCTTTACCCTCTGCACAAACTCGATTCCCCAAAATGCCCCTACCTTTCTTTGAAATCCCACTTCCCTCCTCGTCTCTCTCGCCGCTTCCTCTCCTCCTCAACCATTCGCGCGAGCTCTGCTGTTATCACGGAGTCGGTAAACCATGATACAAGTAAAAAGCAGGATCAAGCAAAGGAAGTTGATTTCTTTGCGTGCCCAATATGTTATGAACCTTTGATAAGAAAAGGTCCTTCCGGGCTTAACTTATCAGCAATCTACAGGTCAGGGTTTAAGTGCAAGAGATGCAATAAATCATACTCCAGCAAAGATATGTATCTGGATTTGACTGTCACTTCTGGGTTGAGGGATTATACTGAAATTCAACCAGCAAGGACTGAGCTTTTCAGGAGTCCACTTGTTTCATTCTTGTACGAAAGAGGGTGGCGTCAGAATTTCAATCGAAGTGGCTTTCCTGGTCCTGATGAAGAGTTCAAAATGGCTCAAGAGTTCTTCAAACCAGCCGAAGGTGGTCTTCTCGTTGATGTTAGCTGTGGTAGTGGCTTATTTTCCCGAAAATTTGCCAAATCTGGAGTTTATTCTGGCGTCACTGCTTTAGATTTTTCTGAAAATATGCTTCGCCAGTGTTACGATTTCATTAAGAAAGATGAGACTCTTTCAACCAGTAACATTGCTCTTGTAAGGGCAGATGTTTCTAGGCTTCCCTTCTCATCAGGTTCCATTGACGCTGTTCATGCTGGCGCAGCCTTGCATTGCTGGCCATCTCCCTCCAATGCTATTGCTGAAATCACCCGGGTACTAAGAAGTGGTGGAGTCTTTGTTGGATCAACTTTTCTGCGTTACACTTCATCCACTCCCTGGTTTGTGCGCCCTTTGCGAGAGAGAATTCTACAGGGATATACCTATTTGACAGAGGAAGAGATTAAAGACCTTTGCACATCATGTGGCCTTACCAATTACTCCTGCAAAGTTCAACAGTCTTTTATTATGTTTACTGCTCAGAAGCCTTAA 1032 0.4428 MATAASPFLYPLHKLDSPKCPYLSLKSHFPPRLSRRFLSSSTIRASSAVITESVNHDTSKKQDQAKEVDFFACPICYEPLIRKGPSGLNLSAIYRSGFKCKRCNKSYSSKDMYLDLTVTSGLRDYTEIQPARTELFRSPLVSFLYERGWRQNFNRSGFPGPDEEFKMAQEFFKPAEGGLLVDVSCGSGLFSRKFAKSGVYSGVTALDFSENMLRQCYDFIKKDETLSTSNIALVRADVSRLPFSSGSIDAVHAGAALHCWPSPSNAIAEITRVLRSGGVFVGSTFLRYTSSTPWFVRPLRERILQGYTYLTEEEIKDLCTSCGLTNYSCKVQQSFIMFTAQKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1174 343 CDD AdoMet_MTases 180 281 - -
Sto12g1174 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 143 342 IPR029063 -
Sto12g1174 343 Pfam Methyltransferase domain 181 281 IPR013216 GO:0008168
Sto12g1174 343 Gene3D Vaccinia Virus protein VP39 136 342 IPR029063 -
Sto12g1174 343 PANTHER METHYLTRANSFERASE 29 342 - -
Sto12g1174 343 PANTHER - 29 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1174 Sto-Chr12 7463626 7467677 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto12g1174 Methyltransf_11 1.3e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1174 - - gmx:100798970 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1174 12 7463626 7467677 Sto12g1174 12 7463626 7467677 ECH