Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1150 ATGGGTATCACTGCATTATTCTTGTTGCTATTTCTTGAATTGCCAAGAATTTTTGCCTCTGGAGTATTCTTAGAGTCGAAGGATTGTGGTGCTAATTGGGTAGCCTACTCATATTCTCGTGGTCAGGAACTTTTTTACATAAACCGGGAAGTAGTGAACAAAGTTACTTTCTGTGAGACCCTCCAATTGTCTATTGCAAATGGTTGCGATTTGAAGGACTATTTTCATAGTAGCAACTGTGCTTCTGATGCTTCTTTAGTTAATTTGCCTTTAAAGGCAGGAAGAAAGCTTTTGCAGAAGGATTTAAGCAATAATTCCACTTCCCAAGATCACCAAAATGTTTCTAAGCCTCTATCAACCCCTCAAGTTGGGATGTTTGCAAGTGGAGCTTTCTTAGTTTGTTGTGCTTTTCTCTGTCCTTGTATTTatggaaagagaagaaaagccACTGCTCATACTGTTCTGACCAAGGACTCAAATTCAATTGATTCGGCTTCCCCCTTCGAAGTGAACTCTGGTTCTGAGAAGATACCTGGGAGTCCACTTCGGGTGCCACCTAGTCCTTCAAGATTCTCAATGTCCCCAAAACTCAAAAGAATTGGGTCATTACATCTTAACTTGAGTCAAATTACAAGAGCTACCCGAAATTTCTCAGAAACTTTACAAATAGGAGAAGGAGGTTTTGGAACTGTTTACCGGGCTCAGCTAGAAGATGGCCTGGTTGTCGCTGTAAAGCGTGCAAAAAGGGAATATTTTGAGAGTTTGAGGACTGAATTCTGCAGTGAAGTTGAAGTTCTGGCTAAAATTGATCATCGGAACCTGGTGAAGCTGCTGGGTTACATTGACAAGGGAAATGAACGTCTTCTTATTACAGAGTATGTGCCAAATGGCACTCTTAGAGAACATTTGGATGGTCTACGTGGAAATATCCTAGATTTCAATCAGCGCCTCGAAATTTCCATTGATGTTGCTCATGGCTTGACCTATCTACATACATATGCTGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAACATCCTTCTGACAGAAAGCTTGAGAGCCAAAGTTGCTGATTTTGGATTTGCAAAGCTCGGTCCTACTAACACTGATCAGACACACATCTCTACCAAAGTGAAGGGAACAGTTGGTTATCTGGACCCTGAGTACATGAAAACATACCAGCTCACTCCCAAGAGTGATGTTTACTCCTTTGGAATTTTGCTTCTAGAGATTGTGACAGGCCGCCGTCCAGTGGAGTTGAAGAAACCCGTTGAAGAGCGGGTTACACTACGATGGGCTTTCAGGAAGTTCAATGAAGGAAATGTGGTGGAACTGCTAGATCCATTAATGAAGGAAGCTGTAAATGCAGAGGTTCTGATGAAGATGCTTGATTTGGCATTTCAATGTGCAGCGCCTGTTCGAGCCGATCGACCTGACATGAAATCGGTGGTACAGCAGTTGTGGACAGTAAGAGCAGAATATCTCAAGAGTGCAAAGAGaggatag 1512 0.414 MGITALFLLLFLELPRIFASGVFLESKDCGANWVAYSYSRGQELFYINREVVNKVTFCETLQLSIANGCDLKDYFHSSNCASDASLVNLPLKAGRKLLQKDLSNNSTSQDHQNVSKPLSTPQVGMFASGAFLVCCAFLCPCIYGKRRKATAHTVLTKDSNSIDSASPFEVNSGSEKIPGSPLRVPPSPSRFSMSPKLKRIGSLHLNLSQITRATRNFSETLQIGEGGFGTVYRAQLEDGLVVAVKRAKREYFESLRTEFCSEVEVLAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGLRGNILDFNQRLEISIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESLRAKVADFGFAKLGPTNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELKKPVEERVTLRWAFRKFNEGNVVELLDPLMKEAVNAEVLMKMLDLAFQCAAPVRADRPDMKSVVQQLWTVRAEYLKSAKRG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1150 503 MobiDBLite consensus disorder prediction 167 191 - -
Sto12g1150 503 Gene3D Phosphorylase Kinase; domain 1 189 293 - -
Sto12g1150 503 SMART serkin_6 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1150 503 ProSiteProfiles Protein kinase domain profile. 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1150 503 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Sto12g1150 503 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 20 499 - -
Sto12g1150 503 Gene3D Transferase(Phosphotransferase) domain 1 294 502 - -
Sto12g1150 503 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Sto12g1150 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Sto12g1150 503 PANTHER OS07G0166700 PROTEIN 20 499 IPR045272 GO:0004714|GO:0006468
Sto12g1150 503 SUPERFAMILY Protein kinase-like (PK-like) 200 491 IPR011009 -
Sto12g1150 503 CDD STKc_IRAK 223 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1150 Sto-Chr12 7272029 7275802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1150 132 489 Receptor kinase-like Gene Family AT3G46290 40.496 2.01e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Sto12g1150 PK_Tyr_Ser-Thr 8.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1150 - - aprc:113845864 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1150 12 7272029 7275802 Sto12g1150 12 7272029 7275802 ECH