Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1111 ATGGCTAGAAGCATAATCATTTTGTGTATTGTAGCCTTCACTTTCTGCACCTTCCTGCATATCACGGCTTCGGCCCAGGAAGTGCACGTGGTCGGAGACGACTTGGGCTGGGCCGTTCCTCCTGCCGCCGCCGCATTCTACCAGGCCTGGGCCTTGTCCCATACCTTCCACGTAGGAGACATCCTCCTGTTCAATTTTACGGACCGAGATGAGGACGTGGCACAGGTGACGAAGGAGGCGTTGTTGGAGTGCAATACAAGCAACCCAATCGCAGTTAAGAAGACGAGTCCTGCAAATTTCACGTTGGACGCAGAGGGAGACTATTATTTCACTAGCACTTTCTCCAACCACTGTGCTTCAGGTCAAATCCTAGCCGTCCACGTGTTCGCTCATGGGCCTTCACCCGTTCCTTCTCCCGCGCCCAAGCCCAGAGGCCCACGTAACTACACCGTTGGTGGTGTCTTGGGCTGGCTCGTTCCACCCGGCGGTGAAATCGTGTATGATTCTTGGGCCAGCGTCAGAAGCTTCCAAGTCGGAGACGCTCTCGTGTTCTTGTTCGTGAATGGGACGCAAGACGTCGCGGTGGTGACGAAGGAAGCGTACGATAAGTGCGAAACGAACAGCAGCATAGCGGTGTATTCGAGTAGTCCCACTAGAATTGTGTTGGACACCATTGGTGAACATTACTACACGAGCACTTATAAGGATCATTGTTGCTCCATCATCGTGGCCATGGCTCTATTATTTGGAGCAACCGAAGCTACAGAACATGTTGTTGGTGGTAGCTATGGATGGAACCTCCCTCCCAATCAGACCTTCTACTCAGACTGGGCAACTTCCAACAAATTCTTCGTAGGAGACTCACTTGTGTTCATTCTGGACGTGGACCAGAAAATAGGAGATGTATCAATGGAAGAATTCGAGAACTGCACCATCCCAGGCATCCAATTTGGAGGAATCGACGACCACTGCAATAGGCCACAAGTTATCAACAATGAGTGGCCAAACTCTGCTTCTCCTGCTCAGGCTCCATCTTCCTCAGCTTCAAGTTCAAATCTCTCTTCTGCAGCCTTACCTTTCTTTCCTCCATTGCTGCTGTCTATTTCCTCACCCACATATTATTCTAAGGGTGCAGTGTATTACTGCTACGTGCAATTTGAGTACTTGAAGTTGATTAagtttggtttaggattttgcaaTTTGCATTGA 1209 0.4921 MARSIIILCIVAFTFCTFLHITASAQEVHVVGDDLGWAVPPAAAAFYQAWALSHTFHVGDILLFNFTDRDEDVAQVTKEALLECNTSNPIAVKKTSPANFTLDAEGDYYFTSTFSNHCASGQILAVHVFAHGPSPVPSPAPKPRGPRNYTVGGVLGWLVPPGGEIVYDSWASVRSFQVGDALVFLFVNGTQDVAVVTKEAYDKCETNSSIAVYSSSPTRIVLDTIGEHYYTSTYKDHCCSIIVAMALLFGATEATEHVVGGSYGWNLPPNQTFYSDWATSNKFFVGDSLVFILDVDQKIGDVSMEEFENCTIPGIQFGGIDDHCNRPQVINNEWPNSASPAQAPSSSASSSNLSSAALPFFPPLLLSISSPTYYSKGAVYYCYVQFEYLKLIKFGLGFCNLH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1111 402 Gene3D - 252 337 IPR008972 -
Sto12g1111 402 Gene3D - 146 245 IPR008972 -
Sto12g1111 402 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Sto12g1111 402 ProSiteProfiles Phytocyanin domain profile. 147 254 IPR003245 GO:0009055
Sto12g1111 402 SUPERFAMILY Cupredoxins 147 239 IPR008972 -
Sto12g1111 402 Gene3D - 27 136 IPR008972 -
Sto12g1111 402 ProSiteProfiles Phytocyanin domain profile. 255 359 IPR003245 GO:0009055
Sto12g1111 402 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Sto12g1111 402 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Sto12g1111 402 Pfam Plastocyanin-like domain 265 311 IPR003245 GO:0009055
Sto12g1111 402 Pfam Plastocyanin-like domain 165 238 IPR003245 GO:0009055
Sto12g1111 402 PANTHER BLUE COPPER PROTEIN 148 239 IPR039391 GO:0009055
Sto12g1111 402 PANTHER BLUE COPPER PROTEIN 6 132 IPR039391 GO:0009055
Sto12g1111 402 PANTHER BLUE COPPER PROTEIN 242 312 IPR039391 GO:0009055
Sto12g1111 402 PANTHER EARLY NODULIN-LIKE PROTEIN 1 148 239 - -
Sto12g1111 402 PANTHER EARLY NODULIN-LIKE PROTEIN 1 6 132 - -
Sto12g1111 402 PANTHER EARLY NODULIN-LIKE PROTEIN 1 242 312 - -
Sto12g1111 402 SUPERFAMILY Cupredoxins 253 314 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1111 Sto-Chr12 6961018 6967520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1111 150 238 Phytocyanin Superfamily AT2G25060 40.000 1.95e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1111 - - lang:109328745 269.626