Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1106 ATGAATGGAGAATATAGAATAGAGAGTGGAGGGTCATCTTCAAAATGCAACAACATGAATAGGATTGCAATGAGAGCTCCCACCACTACTCGTATCACTGAGGAAAGAGTTGTCAACAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAgGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCAAAGAATTGGGCACACTTCCCTCATATTCATTTTGGGTTGATGTTGGAGACCAACAATCAAGCTAAGATGGACAATGGTGGTGAGAAGCATTTAAAGTCAAGGGCAGCACTTTTGAACAAATGA 363 0.4242 MNGEYRIESGGSSSKCNNMNRIAMRAPTTTRITEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKMDNGGEKHLKSRAALLNK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1106 120 Gene3D High mobility group box domain 31 90 IPR036910 -
Sto12g1106 120 PANTHER AXIAL REGULATOR YABBY 5 4 109 - -
Sto12g1106 120 Pfam YABBY protein 11 93 IPR006780 GO:0007275
Sto12g1106 120 PANTHER PROTEIN YABBY 6-RELATED 4 109 IPR006780 GO:0007275
Sto12g1106 120 SUPERFAMILY HMG-box 37 86 IPR036910 -
Sto12g1106 120 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1106 Sto-Chr12 6914429 6915600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1106 5 103 C2C2-YABBY Transcription Factor Family AT2G26580 76.768 2.87e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto12g1106 YABBY 2.7e-41 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1106 K25796 - gmx:100499942 202.601