Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1097 ATGAGGAAAGTAAGGAGAAAGGTAGGGAGGTATGAGGTGGGTCGAACTATTGGCGAAGGTACATTCGCTAAGGTTAAATTCGCAAGGAACACGGAGACAGGGGAGAGCGTGGCTATCAAGGTCTTGGCTAAGAGCACCGTTCTCAGGCACCAAATGGTTGAACAGGTTCAGCGGGGAAGACTTTCAGAAAATGAATCTAGGCAGTACTTTCAACAACTTATAGATGCTGTTGCTCATTGTCATGACAAGGGTGTGTACCATAGAGACTTAAAGCCTGAAAATCTTTTGCTTGATGCTTATGGAAAATTGAAGGTTTCTGACTTTGGACTGAGTGCATTAGCTAAGCAGGGTGTTGACCTTCTTCACACCACATGTGGAACTCCAAATTATGTTGCCCCTGAGGTGCTTAGCAATCTAGGTTATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATCCTCTATGTTCTTATGGCTGGGTATCTACCTTTTGAGGAGGCAGACCTTCCAGCCTTGTACAAAAAGATCAATGCTGCAGAATTCACTTGCCCATTCTGGATTTCTGTTGGGGCAAAGACATTGATACATAAAATACTggacccaaatcctaaaacaCGTATTCGAAttgaagaaataagaaaagatccATGGTTCCGAAGAAATTATGTTCCTGCCGAACTCCGGGAAAATGAGGAAGTGAATTTGGATGATGTTCAAGCTGTTTTTGATGATATGGAGCACCATTTTGTAGCTGAACGACAGTCAGAAAATACTGAGGGAGGTCCTTTGGTGATGAATGCATTTGAGATGATTACCTTATCACAAGGGCTGAATTTATCAGCATTATTTGACAGGCGCCAGGATTTTGTAAAGCGGCAAACTCGTTTTGTTTCACGTAAACCAGCAAAAGTTATAATTTCATCTATTGAAGCTGTTGCGGAGTCAATGGGTCTGAAGGTCCATTCTCGAAACTACAAGGTCTTTGAAGTTGCACCATCCCTTTTCATGGTAGATGTTCGGAAGGCTGCTGGGGATACTCTCGATTATCACAAGGTTAGTTTTACAAGAATCTTTGTGCCAAActggaaaatattatttggaGAGCCACAGAGTCAACGCCAAATTCTAGCATGCTTAGACAAGCGACTTGCTGATCCAGTTCTCGTGGATGTGATGCAAATCGAAATTGAAAGGGCAATCAAAGCTGCACCTTGTTTTGTAGCCATAATATTGCACTGTAAAATCAGAGGAACCCATAGCCTTAAAAGTGTGTGGCCCCATGTAAAGGCCAAAGGGTTTGAAACAAGCATTTATGCTTGCAAAGAAGAGGGATCTGCCATGGTTCCCTGGAAAACAACCAGGGAAGGGACACTCTTGTTTGATAGACCAGAACAGCCTGACAATGAAAGCACTCGCAGACTAAGCTGCCTAGCACTGGAAAGAACAGCAATACCCGAATCGGAGATAGCACACTTTGACACATCTAGATCATTAAGCAGAAGGCAGTCATCTGCAATTGCAGCCAAGCTTGCATCAGTGATTCTCCTGCAGCCATCAAGATTTAGTAGCTCCAAGGTTCCACCATGTAGTCTAGATAAGGCTGAAATGATGTTATCCGTCAAATTCCAGCAGCCAGTGAGATTCACCTTGACAAGTCCTGCCTCACAATTCTCCAATAGCGGAAGAAGCCCAGCATCTGTTATTCCATAA 1713 0.4232 MRKVRRKVGRYEVGRTIGEGTFAKVKFARNTETGESVAIKVLAKSTVLRHQMVEQVQRGRLSENESRQYFQQLIDAVAHCHDKGVYHRDLKPENLLLDAYGKLKVSDFGLSALAKQGVDLLHTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILYVLMAGYLPFEEADLPALYKKINAAEFTCPFWISVGAKTLIHKILDPNPKTRIRIEEIRKDPWFRRNYVPAELRENEEVNLDDVQAVFDDMEHHFVAERQSENTEGGPLVMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRKPAKVIISSIEAVAESMGLKVHSRNYKVFEVAPSLFMVDVRKAAGDTLDYHKVSFTRIFVPNWKILFGEPQSQRQILACLDKRLADPVLVDVMQIEIERAIKAAPCFVAIILHCKIRGTHSLKSVWPHVKAKGFETSIYACKEEGSAMVPWKTTREGTLLFDRPEQPDNESTRRLSCLALERTAIPESEIAHFDTSRSLSRRQSSAIAAKLASVILLQPSRFSSSKVPPCSLDKAEMMLSVKFQQPVRFTLTSPASQFSNSGRSPASVIP 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1097 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Sto12g1097 570 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1097 570 SUPERFAMILY Protein kinase-like (PK-like) 8 220 IPR011009 -
Sto12g1097 570 Gene3D Kinase associated domain 1, KA1 260 364 - -
Sto12g1097 570 Gene3D Transferase(Phosphotransferase) domain 1 1 52 - -
Sto12g1097 570 CDD CIPK_C 267 353 - -
Sto12g1097 570 Pfam NAF domain 263 322 IPR004041 GO:0007165
Sto12g1097 570 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Sto12g1097 570 SMART serkin_6 11 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1097 570 Gene3D Transferase(Phosphotransferase) domain 1 53 227 - -
Sto12g1097 570 PANTHER - 56 354 - -
Sto12g1097 570 PANTHER - 4 58 - -
Sto12g1097 570 Pfam Protein kinase domain 54 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1097 570 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 58 - -
Sto12g1097 570 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 56 354 - -
Sto12g1097 570 ProSiteProfiles NAF domain profile. 261 285 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1097 Sto-Chr12 6868850 6881059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1097 1 328 CBL-interacting serine-threonine protein kinases AT5G35410 65.416 3.09e-176 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto12g1097 Pkinase 9.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1097 - - gmx:100811380 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1097 12 6868850 6881059 Sto12g1097 12 6868850 6881059 ECH