Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1079 ATGGAAGGGAACAAGGACGATGCATTGAAATGTTTGAAAATTGGGAAACATGCATTAGAAGCTGGGGATCGTGCCCGTGCTTTGAAGTTCGTGACCAAAGCTCGTCGTCTTGACCCGACGTTGCCGGTCGACGATTTATTGTCGGCGATAGAGAAGGAGACTGATGATCAACCTGCGGCGGCGCCCACTGCTAATGGACAATCTGGATCGTCTCCGTCAAAGCCCTCCGATAAACCTTCGATTCGCCATAGGGGTTCGCCTACGCTGTCGTCGTCTTCATCATCAGCTACATATACAGAGGAGCAAATTACAATAGTCAGAGAGATTAGAAGGAAGAAAAATTACTatgagattttgggattagacAAGAGTAATTGCACGGTTGAGGATGTGCGAAAAGCCTATAGAAAACTGTCCTTGAAGGTTCATCCTGATAAGAACAAAGCCCCCGGTGCTGAGGAAGCGTTCAAGTCAGTTTCCAAGGCGTTTCAGTGTCTTAGCAATGAAGAGAGTCGAAGAAAGTATGATCTCGTCGGAGAAGATGATAATGAACCAGCAACAAGGCAGAGGGCAAGAgcgtatcatcatcatcatcacggGTATTACGATGCTGACATTGACGCAGAGGAAATATTCAGGAATTTCTTCTTTGGTGGGATGGCTCCTGCGACTACACCTTTTGGTGGCTTCAGTTTTGGACCAGGGATGCGTCATAGGCCGGCTGAACATGGGTCCAGTGGCGTCAACCTTCGTGCTCTGATTCAATTGCTTCCGATTCTGCTCGTTGTGCTTCTTAACTTCTTGCCCTCTTCTGATCCAATCTATATGCTTTCTCGGTCTTATCCATATACACACAGGTTTACTACTACAAAGGGTGTCAATTATTATGTTAAATCTTCCACCTTTGCTCAAGATTACCCTCTGAATAGCCCCGAACGCACGAACCTTGAAGCAGGGGTTGAGAAGGAATACTCCAGCATTCTTTCACAGAACTGTCGGCTTGAGTTACAGCGCAGACAATGGGGGTATATCCAGGAAACACCACACTGTGATATGCTTCGCAATTTTAAGAATTAA 1077 0.4448 MEGNKDDALKCLKIGKHALEAGDRARALKFVTKARRLDPTLPVDDLLSAIEKETDDQPAAAPTANGQSGSSPSKPSDKPSIRHRGSPTLSSSSSSATYTEEQITIVREIRRKKNYYEILGLDKSNCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESRRKYDLVGEDDNEPATRQRARAYHHHHHGYYDADIDAEEIFRNFFFGGMAPATTPFGGFSFGPGMRHRPAEHGSSGVNLRALIQLLPILLVVLLNFLPSSDPIYMLSRSYPYTHRFTTTKGVNYYVKSSTFAQDYPLNSPERTNLEAGVEKEYSSILSQNCRLELQRRQWGYIQETPHCDMLRNFKN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1079 358 MobiDBLite consensus disorder prediction 60 76 - -
Sto12g1079 358 CDD DnaJ 114 168 IPR001623 -
Sto12g1079 358 Pfam DnaJ domain 114 176 IPR001623 -
Sto12g1079 358 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Sto12g1079 358 SUPERFAMILY Chaperone J-domain 111 230 IPR036869 -
Sto12g1079 358 Pfam Domain of unknown function (DUF1977) 269 340 IPR015399 -
Sto12g1079 358 ProSiteProfiles dnaJ domain profile. 114 179 IPR001623 -
Sto12g1079 358 MobiDBLite consensus disorder prediction 83 97 - -
Sto12g1079 358 Gene3D DnaJ domain 110 225 IPR036869 -
Sto12g1079 358 PANTHER - 1 357 - -
Sto12g1079 358 PANTHER AT29763P-RELATED 1 357 - -
Sto12g1079 358 MobiDBLite consensus disorder prediction 49 97 - -
Sto12g1079 358 PRINTS DnaJ domain signature 116 134 IPR001623 -
Sto12g1079 358 PRINTS DnaJ domain signature 135 150 IPR001623 -
Sto12g1079 358 PRINTS DnaJ domain signature 151 171 IPR001623 -
Sto12g1079 358 PRINTS DnaJ domain signature 171 190 IPR001623 -
Sto12g1079 358 SMART dnaj_3 113 171 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1079 Sto-Chr12 6758944 6760020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1079 109 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 1.20e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1079 K09518 - qsu:112008962 460.299