Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1073 ATGGCGACTTTCTTCCGGAGGCTGGCAAAATCCACACCCATTGCATTCACAAATGCTTTTGGTGGCCATTCCAACTCCTCTCACTCTAATTTCAGGCTTCCTTTTGGTGCAATTGCCGCCATCTCCGGTGGATTCTCCTACTTGTACTACTACTCCTCACCCAACCTGGTTTATTTAGAACAGACAAAAGAAGAGGGAAGTCAAAATATTGcACTAGCTCCTAATAAGTGGGTTGAATTTAAGTTGCAAGACACTGCCAGGGTTAGTCACAATACCCAGTTATTCAGGTTTTCATTTGATCCCACTAAGAAGTTAGGCTTGGATGTTGCTTCTTGCATTCTTACAAGGGCTCCTTTGGGACAAAATGCTGAAGGAAAACCAAATTTTGTTGTTCGTCCATATACTCCTATATCGGATCCTGAATCTAAAGGATACTTTGATTTATTAATCAAGGTGTATCCTGAGGGACAAATGAGTCAACATTTTGCAAGCTTAAAACCAGGCGATGTAATTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCCAATATGAAGAAGCACATTGGCATGATTGCGGGTGGCACCGGAATTACTCCAATGCTTCAGATAATTGAGGCTATATTGAAGAATCCAGATGACAAAACTAAGATATCATTGATTTATGCTAATGTCTCCTCCGATGACATCCTACTCAAAAAGAAGCTTGACTCTCTAGAAGCTGGCCATCCAAACTTAAAGATATTCTACACTGTAGATAACCCCACAAAGAATTGGAGCGGTGGTGCAGGTTACATATCCAAGGATATTGCTGAGAAAGGCTTACCTGGTCCTAGCGACGATACTCTTATTCTTGTGTGTGGTCCCCCAGGGATGATGAACCATATATCTGGTGGAAAGGCCAAAGACTGGACACAAGGAGAGGTTTCTGGCATACTCAAAGAGCTTGGATACACTGAGAAAAtggtttataaattttga 984 0.4136 MATFFRRLAKSTPIAFTNAFGGHSNSSHSNFRLPFGAIAAISGGFSYLYYYSSPNLVYLEQTKEEGSQNIALAPNKWVEFKLQDTARVSHNTQLFRFSFDPTKKLGLDVASCILTRAPLGQNAEGKPNFVVRPYTPISDPESKGYFDLLIKVYPEGQMSQHFASLKPGDVIEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQIIEAILKNPDDKTKISLIYANVSSDDILLKKKLDSLEAGHPNLKIFYTVDNPTKNWSGGAGYISKDIAEKGLPGPSDDTLILVCGPPGMMNHISGGKAKDWTQGEVSGILKELGYTEKMVYKF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1073 327 Pfam Oxidoreductase NAD-binding domain 192 298 IPR001433 GO:0016491
Sto12g1073 327 SUPERFAMILY Riboflavin synthase domain-like 71 185 IPR017938 -
Sto12g1073 327 Pfam Oxidoreductase FAD-binding domain 80 182 IPR008333 -
Sto12g1073 327 PANTHER NADH-CYTOCHROME B5 REDUCTASE 22 327 IPR001834 GO:0016491
Sto12g1073 327 Gene3D - 174 327 IPR039261 -
Sto12g1073 327 Gene3D Translation factors 70 173 - -
Sto12g1073 327 CDD cyt_b5_reduct_like 80 327 - -
Sto12g1073 327 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 75 183 IPR017927 GO:0016491
Sto12g1073 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 132 139 IPR001709 GO:0016491
Sto12g1073 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 191 210 IPR001709 GO:0016491
Sto12g1073 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 229 240 IPR001709 GO:0016491
Sto12g1073 327 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 284 292 IPR001709 GO:0016491
Sto12g1073 327 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 22 327 - -
Sto12g1073 327 PRINTS Cytochrome B5 reductase signature 132 139 - -
Sto12g1073 327 PRINTS Cytochrome B5 reductase signature 168 182 - -
Sto12g1073 327 PRINTS Cytochrome B5 reductase signature 191 210 - -
Sto12g1073 327 PRINTS Cytochrome B5 reductase signature 229 240 - -
Sto12g1073 327 PRINTS Cytochrome B5 reductase signature 284 292 - -
Sto12g1073 327 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 170 319 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1073 Sto-Chr12 6732336 6737095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1073 68 327 NADPH P450 reductases AT5G17770 40.458 8.36e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1073 K00326 - gmx:100781191 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1073 12 6732336 6737095 Sto12g1073 12 6732336 6737095 ECH