Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1068 ATGGCCACTTCCACCACCATACCCAGAGACGAATCCGACTATGACAGTAGCTCCTCCTCCTTCACCACCGTCCCGGACTCCACCCGCAGCTGGCTCAGCAACTTCAGCTTCAGCAGCCGCCGCCGCAGCAGCTGCTCCCACGCCAAGCCCCACAAGGCCAACCACGCCGCATGGGAGGCCATCTCCCGCCTCCGCCGCGACATTAACGGCGGCCACCTCGGCCTCCACCACTTCCGCCTCCTCCGGCGCCTCGGCGGCGGCGACATCGGCAACGTCTACCTCTGCCAGATTAGGAACCCCCTTGTGGTTGTGGGgTCGAATCTGTACGCGATGAAAGTGGTGGACAGAGAAGCCCTCTCCGTGAGGAACAAATTGCAGAGAGCCGAGATGGAGAAGCAGATTCTGGGAATGCTCGATCATCCCTTCCTTCCCACTCTCTATGCAGATTTTGACGCCTCTCATTACTCTTGCTTGCTCATGGAGTTCTGCCCTGGTGGCGATTTGTACGCCTCTCGCCTTCGTCAGCCACGCCAGCGATTTCCCATTCAATCCGCCAAGTTCTATGCTGCTGAGACACTTCTGGCTCTGGAGTATCTTCACATGATGGGGATAGTGTATAGAGACTTAAAGCCAGAGAATGTGCTTGTCAGAGAAGATGGCCACATTATGCTTTCTGATTTTGATCTCTCTCTTAAATGCGACGTCGTTCCGAAGCTCTTGAGAAGCAAATCCACCTTCAGAACCACCACAAGAAacccatcatcatcttcatcaccaCATGCCTGTGCTACCCCCATgaGCAAGAGCAAGAGGGAAGGTAGAGTCACAACAATCATAAGAGAAAACGTTAATGCAGTCCAAAGAGAAccaGAGCTAGTGGCAGAGCCCATAAATGCAAGGTCAAAGTCCTTTGTGGGGACACATGAGTACTTAGCACCAGAAGTGATCTCAGGGCAAGGCCATGGGAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTGTACGGAAGAACACCCTTCAAAGGAGAGAACAACGGGAAGACACTCATCAACATCCTCAAACAGCCATTGGCTTTCCCAAGAATTGCAGCAAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAGAGTTCAAGACCTCATAACCAAGCTTTTGGTGAAGAATCCCAAGAAGAGGATCGGAAGCTGCTTGGGTTCTGTGGAGATCAAGAGGCATGAATTCTTCAAAGGCGTGAATTGGGCTCTGATTAGATCAGTTAAGCCTCCTGAGATTCCTGCTCATCATGATCATATGAACAAcaGAGTTTTGCTACCAAAATTAAGCAAGAAACAGAGGGATCAACCATATCAGATTACTCATCATTTTGACTACTTCTAA 1386 0.4986 MATSTTIPRDESDYDSSSSSFTTVPDSTRSWLSNFSFSSRRRSSCSHAKPHKANHAAWEAISRLRRDINGGHLGLHHFRLLRRLGGGDIGNVYLCQIRNPLVVVGSNLYAMKVVDREALSVRNKLQRAEMEKQILGMLDHPFLPTLYADFDASHYSCLLMEFCPGGDLYASRLRQPRQRFPIQSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSTFRTTTRNPSSSSSPHACATPMSKSKREGRVTTIIRENVNAVQREPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEFEEMVRVQDLITKLLVKNPKKRIGSCLGSVEIKRHEFFKGVNWALIRSVKPPEIPAHHDHMNNRVLLPKLSKKQRDQPYQITHHFDYF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1068 461 CDD STKc_phototropin_like 76 432 - -
Sto12g1068 461 PANTHER FLIPPASE KINASE 1-RELATED 7 461 - -
Sto12g1068 461 Coils Coil 111 131 - -
Sto12g1068 461 SUPERFAMILY Protein kinase-like (PK-like) 65 434 IPR011009 -
Sto12g1068 461 Pfam Protein kinase domain 79 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1068 461 Pfam Protein kinase domain 301 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1068 461 MobiDBLite consensus disorder prediction 1 27 - -
Sto12g1068 461 Gene3D Phosphorylase Kinase; domain 1 78 432 - -
Sto12g1068 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Sto12g1068 461 MobiDBLite consensus disorder prediction 246 272 - -
Sto12g1068 461 MobiDBLite consensus disorder prediction 246 264 - -
Sto12g1068 461 PANTHER PROTEIN KINASE PINOID 2 7 461 - -
Sto12g1068 461 ProSiteProfiles Protein kinase domain profile. 78 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1068 461 Gene3D Transferase(Phosphotransferase) domain 1 167 429 - -
Sto12g1068 461 SMART serkin_6 78 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1068 Sto-Chr12 6703040 6704729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1068 1 461 AGC Kinase Gene Family AT2G26700 57.223 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto12g1068 Pkinase 3.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1068 K08286 - gmx:100775924 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1757 3 13677078 13679561 Sto12g1068 12 6703040 6704729 CCT
Sto12g1068 12 6703040 6704729 Sto12g1068 12 6703040 6704729 ECH