Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1062 ATGGGCAGCTCATCAAACGCCGCCGTTTCCGGCCGCATTCCTCCGGTGGACAAGGGCGTCGATTATGCGCAGTATTTCTGCACCTATTCCTTTCTCTACCACCAGAAGGATATGCTTTCCGATCGGGTTCGCATGAACGCTTACTACAACGCCGTTTTTCAGAACAAGCACCACTTCAATGGCAAGGCTGTATTAGATGTGGGAACTGGAAGTGGAATTCTTGCTATATGGTCAGCTCAAGCAGGTGCAAGGAAAGTATATGCGGTAGAAGCAACTAAGATGTCAGAACATGCTCGTGCTCTTGTCAAAGCAAATAATCTCGAGCATGTGGTTGAAGTCATTGAGGGCTCAATGGAGGATATTACGTTGCCAGAGAAAGTTGATGTCATAATCTCCGAGTGGATGGGATATTTTCTTCTGCGGGAATCTATGTTTGATTCGGTTATATGTGCTCGTGATCGTTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATTGCACCTGTCAAAACTGGGTTACTAGATCACAAAGTGGGTGATTATCACTCTGCTATGGATGATTGGTACAACTTTGTTGATGATACAAAAACATATTACGGTGTTGATATGAATACATCGATGTGGAACAACCTTCAACCACACCAAATCATAGGGACAGCTGCTGTAATAAAGGAGATTGATTGTTTAACTGCTACTGTGGACGATATAAAGGAAGTCAGATCAAATTTTTCTTTGTCAATAACTGTTGAAAACACAAAGCTTTGTGGCTTTGGAGGGTGGTTTGATGTTCATTTTCGGGGAAGAAGTGAAGATCCGGCTGTACAGGAGATTGAACTAACTACAGCTCCTAGCATAAATTACAATACGCACTGGGGCCAACAGGTTTTCCTCTTGCATCCCCCACCTCGCGTCACTAATGGTGATACTTTAAACATCTCTTTCTTCATGAATCGCTCAAAGGAAAACCATCGTCTAATGGAGGCTGAGTTTGAGTGTGAATTGAAATGTCCTGACAAGCACAACGCACCTTTCACAAAGAAGTACTACATTGAATGA 1071 0.4351 MGSSSNAAVSGRIPPVDKGVDYAQYFCTYSFLYHQKDMLSDRVRMNAYYNAVFQNKHHFNGKAVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLEHVVEVIEGSMEDITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWIAPVKTGLLDHKVGDYHSAMDDWYNFVDDTKTYYGVDMNTSMWNNLQPHQIIGTAAVIKEIDCLTATVDDIKEVRSNFSLSITVENTKLCGFGGWFDVHFRGRSEDPAVQEIELTTAPSINYNTHWGQQVFLLHPPPRVTNGDTLNISFFMNRSKENHRLMEAEFECELKCPDKHNAPFTKKYYIE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1062 356 CDD AdoMet_MTases 64 163 - -
Sto12g1062 356 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 334 IPR025799 GO:0016274|GO:0018216
Sto12g1062 356 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Sto12g1062 356 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Sto12g1062 356 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 14 331 - -
Sto12g1062 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 340 IPR029063 -
Sto12g1062 356 Gene3D - 166 356 - -
Sto12g1062 356 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 14 331 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1062 Sto-Chr12 6681798 6684690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1062 25 316 C2H2 Transcription Factor Family AT3G12270 32.923 6.68e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1062 K11434 - gmx:100790625 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1062 12 6681798 6684690 Sto12g1062 12 6681798 6684690 ECH