Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1055 ATGGCATCATTATACACTGCATGGGTATCACCATTCGAATTCGGGTTCTTGGAGAAACCAAAAGCTCCGCTTTCGATTACAGACAACATTGTGAATGGGTTGTTCGGTGTGGATATAGTGCTCACATTCTTCGTGGCCTATGTGGACAAAGTCTcctacttgttgattgatgacttGAAAAAGATTGGTTGGAGGTATGCGACCTCCTGGCTTGCCTTCGACCTCATCTCCATTGTCCCTTATGAACTTGCTTCTAAGATTTTTCCTTCTCCAATCAAATCCTATGGACTCTTCAACATGCTTCGACTCTGGCGTCTTCGAAGAGTTAGTGCTATGTTTTCTAGACTGGAGAAGGACAGAAACTATAGCTATTTCTGGGTTCGCTGTGCTAAGCTTACCTGTGTTACCCTGTTTGCTGCTCATTGTGCTGGATGCTACTATTACCGTATTGCTGCATGTAATCATAATCCTGAAAATACTTGGATGTGGGAGTTAATGGAAAACTTCCCTCAGCTGAGCTTGTGGACACGATATGTGACATCTATTTACTGGTCTATCTCTACTTTAACAACTGTTGGCTATGGAGATTTCCATCCGGTGAATGCAAGGGAGATGATCTTTTCCATCTTTTACATGCTCTTCAATCTGGGTTTAATGCCATATTTGATTGGTAATATGACCAATTTGGTTGTACATGGCACAAGTCGTACCAGAAAATTTagGGATACCTTCCAAACTGCCTTAAATTTTGCCCAAAAGAACCAACTGCCTGCTCATTTGAAAGACCAAATGCTTGAACATATTTGTTTGGAGTTCAGAACAAACTCAGAGGGATTGCAGCAGCAAGAGAGCCTTGATGCCCTTCCTAGAACCATTAGATCAACCATTTCATATAATCTATTTTACTGTCTGGTGAACAATGTGTACTTGTTTGATGAGGTTTCACATGCCTTGCTTTCTCAACTGGTCTCAGAGATGAAAGCTGAATATTTTCCTCCCAATGAAGATGTTATCTTGGAGCGTGAAGCACCCACAGATTTTTATATACTAGTCACTGGTGCTGTGGTTGTAGGAGAGGCAAAAGCAGGCGATCTCTGTGGTGAGATTGGGGTGCTTTTCAATCGGCCACAGCCTTTTACTGTTCGAACCAAGCGATTAAGCCAACTTCTAAGGCTGAACGGCATTACATTTTTGAATACTATTCAGGCCAATGTTGGAGATGGGAACCTGATAATGAATAATCTCCTTCAGCATTTGAAAGAGATGGAGCATCCATTTGTGAAGGGTGTTTTAATGGAGACAGAGAACTTGCTAGCTTCTGATTCTGATGGCAATGTACCACTATCTGAGGCCATACTTGGAGGACAGGAATCAGTGAGAAAACTTTTAGTCGAAAATGGTGCCAACTTACCAATAGTGCCTTTGTCTCAGGAATGCCAAAACCATCTAAGGCAAAGAAGAAATAACTTGCATAACTCAGTATTTGGGAtaatttcagctcaaaacaaCAAAGTTCATACAAGAGAAGGGATGAAGCTTGGGAATTACCCAACCAGAGTGATAATTAATTGCCATGAAAATGGTGGAGTTGCTGGAAAGCTTGTGCTTCTACCATGTAGCTTCAAGGAGCTACTTGAGATGGGAGCTAATAAATTTGGTGTTGTCTCTGCTAAGATTCTAAGCCAAGATGGAGCTGAGATTGATGATATAGATGTGATTAGAGATGGTGATCATCTTTGGTTTGTCAATTCTGATGAGACCCCTATAAGAATTGGCAATAGACTGGAAAGCCTTCTGGGAGAGGACGATGGTGGTTCCGGCGGCGGAGGGGGTGGAGGCGGAGGAGAGGGCGTAATCAACGATCTTGATCTGAATACTCTGCTCCGGAATGCAAGTCCTCGGTTGCTCTGCACTTATGCACCTCACCAGATACTGCCTCCCACACGCCGCCCCATTGTCCCATATGCCGTCTCCCGCCGCCGCGAACAGGTTGCTCGACGGGAACTGCAAGGCCTCGCCGCCGTAGCAACTGGTGGCTGTCAAAATCataatcaatcaattaattaa 2067 0.4272 MASLYTAWVSPFEFGFLEKPKAPLSITDNIVNGLFGVDIVLTFFVAYVDKVSYLLIDDLKKIGWRYATSWLAFDLISIVPYELASKIFPSPIKSYGLFNMLRLWRLRRVSAMFSRLEKDRNYSYFWVRCAKLTCVTLFAAHCAGCYYYRIAACNHNPENTWMWELMENFPQLSLWTRYVTSIYWSISTLTTVGYGDFHPVNAREMIFSIFYMLFNLGLMPYLIGNMTNLVVHGTSRTRKFRDTFQTALNFAQKNQLPAHLKDQMLEHICLEFRTNSEGLQQQESLDALPRTIRSTISYNLFYCLVNNVYLFDEVSHALLSQLVSEMKAEYFPPNEDVILEREAPTDFYILVTGAVVVGEAKAGDLCGEIGVLFNRPQPFTVRTKRLSQLLRLNGITFLNTIQANVGDGNLIMNNLLQHLKEMEHPFVKGVLMETENLLASDSDGNVPLSEAILGGQESVRKLLVENGANLPIVPLSQECQNHLRQRRNNLHNSVFGIISAQNNKVHTREGMKLGNYPTRVIINCHENGGVAGKLVLLPCSFKELLEMGANKFGVVSAKILSQDGAEIDDIDVIRDGDHLWFVNSDETPIRIGNRLESLLGEDDGGSGGGGGGGGGEGVINDLDLNTLLRNASPRLLCTYAPHQILPPTRRPIVPYAVSRRREQVARRELQGLAAVATGGCQNHNQSIN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1055 688 ProSiteProfiles Ankyrin repeat profile. 443 470 IPR002110 GO:0005515
Sto12g1055 688 Pfam KHA, dimerisation domain of potassium ion channel 519 580 IPR021789 -
Sto12g1055 688 Pfam Cyclic nucleotide-binding domain 330 403 IPR000595 -
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1 481 585 IPR045319 GO:0005249|GO:0006813
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1 4 439 IPR045319 GO:0005249|GO:0006813
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1 440 470 IPR045319 GO:0005249|GO:0006813
Sto12g1055 688 ProSiteProfiles Ankyrin repeat region circular profile. 443 470 - -
Sto12g1055 688 ProSiteProfiles cAMP/cGMP binding motif profile. 310 418 IPR000595 -
Sto12g1055 688 SMART cnmp_10 310 416 IPR000595 -
Sto12g1055 688 Pfam Ion transport protein 3 237 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto12g1055 688 Gene3D - 2 231 - -
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 5 12 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 28 38 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 39 48 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 178 195 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 204 215 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 PRINTS EAG/ELK/ERG potassium channel family signature 222 231 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto12g1055 688 SUPERFAMILY Voltage-gated potassium channels 3 231 - -
Sto12g1055 688 CDD CAP_ED 310 404 IPR000595 -
Sto12g1055 688 Gene3D Jelly Rolls 274 424 IPR014710 -
Sto12g1055 688 ProSiteProfiles KHA domain profile. 519 599 IPR021789 -
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 440 470 - -
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 4 439 - -
Sto12g1055 688 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 481 585 - -
Sto12g1055 688 SUPERFAMILY cAMP-binding domain-like 235 419 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1055 Sto-Chr12 6634536 6640332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1055 484 579 Ion Channels AT2G25600 48.571 9.96e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1055 K21867 - zju:107432387 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1055 12 6634536 6640332 Sto12g1055 12 6634536 6640332 ECH