Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1043 ATGGCGGAGATTCTTGCCGTTTGGCGTGTGATGATTGTCGTCTTGGTTTCGCTTCTGTATCTCAGTGTGCGAGTCAGTACGGAGCCCACTCAGGACAAGCAAGCCCTCCTTGCTTTCTTCTCTCAGACCCGTCACGCCAATCGCCTCCAATGGAACGCATCCGACTCTGCCTGCAACTGGGTCGGCGTCATATGCGACGATTCCGCTTCTTTCGTCTTCTCTCTTCGTCTTCCTGGGGTTGGCCTCGTGGGTGCGATTCCTCCCAACACAATCGGCCGTCTCTCTCGCCTTCGAGTTCTCAGTCTCCGCTCCAATGGTCTCTCCGGCGAGATCCCCGCCGATTTCTCTAATTTGACGGCGCTTCGGAATATCTATCTGCAGGATAACGATTTCTCCGGCGAGTTCCCTGCGACACTCACGCGGTTGACTCGTTTGACTCGCTTGGATCTCTCATCCAACAATTTTTCCGGCTCAATCCCTTTCTCGATCAACAATTTGACACACCTCAGTGGTCTATTCTTGCAGGATAATAGATTCTCTGGTAATCTTCCTAGCATTACTGCCAATCTGGTAAGCTTCAATGTTTCCAATAACAACCTCAACGGTTCGATCCCTCAGTCCCTCTCCAAATTCCCCGCATCCTCATTCGCCGGAAACTTAGATCTCTGCGGAGGACCATTGCAACCATGTACCCCATTCTTCCCGGCGCCGGCGCCGGCACCTTCCTCCCCCGTCGTACCCTCCACTCCAGCTCACAAGAAATCCAAGAAGCTCTCAACAGCTGCCATTATCGCAATTGCAGTAGGGTGTTCCGTGGCCGCCTTGCTCCTATTACTCCTCCTTCTCTTCCTATGCTTCCGTAAACGCCGACGGTCACAGTCCACGAAGCAGCCGAAGCCGATTGCGACGGCGCGTGCGGCGCCGGTGTTGGAGGCGGGAACGTCGTCTTCAAAAGACGACATCACTGGTGGGTCGACGGAGGCAGAGAGAAACAAGCTAGTGTTCTTTGAAGGCGGAATATACAGCTTCGATTTGGAAGATTTGTTACGAGCTTCTGCAGAAGTTCTGGGGAAAGGAAGCGTGGGGACTTCGTATAAGGCAGTGCTGGAGGAAGGAACGACGGTGGTGGTGAAGAGGTTGAAGGATGTGAGTGTGACGAAGAGAGAGTTCGAGAATCAAATGGAGGTTCTGGGGAAGATTAAGCACGAGAATGTGCTTCCTCTCAGAGCATTTTACTACTCAAAGGATGAGAAATTGCTCGTCTACGATTACCTCCCTTCTGGGAGCTTGTCTGCTCTGCTTCACGGGAGCAGAGGGTCAGGGAGGACGCCTCTTGACTGGGACAACCGGATGAGAATAGCACTAGGAGCCGCAAGAGGGCTTCTCCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATAAAAGCCTCCAACATCCTCCTCCGAGGAAACGACCAGGACGCCTGCGTTTCGGACTTCGGGCTGAACCCGTTATTCGGAAACTCAACCCCATCGAACCGGGTCGCAGGCTATCGGGCCCCGGAAGTGATGGAGACCCGGAAAGTGACATTCAAATCGGACGTGTACAGCCTGGGAGTATTACTGCTGGAGCTTCTAACCGGGAAGGCACCGAACCAAGCGTCATTGGGCGAGGAAGGGATTGACCTACCGAGATGGGTTCAGTCGGTGGTTCGAGAAGAATGGACGGCGGAGGTGTTCGATGCGGAGCTGATGAGGTATCATAATATAGAGGAGGAGATGGTTCAGTTGCTGCAGATAGGTATGGCGTGTGTGTCGGTGGTGCCGGATCAGAGACCCACCATGCAAGAGGTGGTTCGTATGATGGAGGAAATTAACCGGGGCGAGACGACGGACGACGGGTTGAGACAGTCGTCGGATGATCCATCGAAGGGATCGGAGGGACAGACGCCGCCGGCTGAGTCAAGGACTCCACCTAGATCGGTGACGCCTTAG 1977 0.5412 MAEILAVWRVMIVVLVSLLYLSVRVSTEPTQDKQALLAFFSQTRHANRLQWNASDSACNWVGVICDDSASFVFSLRLPGVGLVGAIPPNTIGRLSRLRVLSLRSNGLSGEIPADFSNLTALRNIYLQDNDFSGEFPATLTRLTRLTRLDLSSNNFSGSIPFSINNLTHLSGLFLQDNRFSGNLPSITANLVSFNVSNNNLNGSIPQSLSKFPASSFAGNLDLCGGPLQPCTPFFPAPAPAPSSPVVPSTPAHKKSKKLSTAAIIAIAVGCSVAALLLLLLLLFLCFRKRRRSQSTKQPKPIATARAAPVLEAGTSSSKDDITGGSTEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVSVTKREFENQMEVLGKIKHENVLPLRAFYYSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLLHLHVSGKVVHGNIKASNILLRGNDQDACVSDFGLNPLFGNSTPSNRVAGYRAPEVMETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIGMACVSVVPDQRPTMQEVVRMMEEINRGETTDDGLRQSSDDPSKGSEGQTPPAESRTPPRSVTP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1043 658 ProSiteProfiles Protein kinase domain profile. 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1043 658 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Sto12g1043 658 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Sto12g1043 658 Pfam Leucine rich repeat 84 131 IPR001611 GO:0005515
Sto12g1043 658 Pfam Protein kinase domain 353 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1043 658 PANTHER OS05G0480400 PROTEIN 13 638 - -
Sto12g1043 658 MobiDBLite consensus disorder prediction 619 634 - -
Sto12g1043 658 SUPERFAMILY Protein kinase-like (PK-like) 354 617 IPR011009 -
Sto12g1043 658 MobiDBLite consensus disorder prediction 619 658 - -
Sto12g1043 658 Gene3D Transferase(Phosphotransferase) domain 1 425 637 - -
Sto12g1043 658 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Sto12g1043 658 MobiDBLite consensus disorder prediction 635 658 - -
Sto12g1043 658 PANTHER OS05G0588300 PROTEIN 13 638 - -
Sto12g1043 658 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Sto12g1043 658 SUPERFAMILY L domain-like 34 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1043 Sto-Chr12 6552691 6555806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1043 14 638 Receptor kinase-like Gene Family AT5G58300 54.389 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto12g1043 Pkinase 7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1043 - - cpap:110818580 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1043 12 6552691 6555806 Sto12g1043 12 6552691 6555806 ECH