Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1030 CTGCAAGATCAAGATCagactcctcctcctcctcctccatgtATTAGTACTAGTGATGAGGTGGAGCTGAATGAGATTGTTCCAGCTGAAGTAGTGAAGAGTAGTAGGAGTGGTGGTGGATCTTGTAAGAGGGACCGGCACAGCAAGATTAAGACGGCGAGAGGGCTGAGGGATCGGAGAATGAGGTTGTCTCTTCAGGTGGCCAAGAGGTTCTTTGGTCTGCAAGACATGTTGGGTTTTGATAAGGCCAGCAAGACTGTGGAGTGGCTTCTTAATCACTCCAAGGATGACATCAAGAAGCTTGCAATACACAACCATGATACTAATACTTCATCTTCAACCAATTCAGATCAATGCGAGGGGGTGTCTGGTTTGGATCATGAGGAAGTTCCACCACCACTATCGGAGATGAAGagatcattatcatcatcaggAAGAGGCATCAAAGGTAGTGGTAGTACTAGtactagtagtagtagtaggaaGAAGAGTAATAATAAAAGTAGTAATAGCAGTGCAGTATTGCATCCTATAATTGGGAGGGAATCAAGGCAGAAGGCaagagagagagctagagagaggaccaaggagaaggagaagatgaagagtcACAAATTAATGTTACTACGACCTCCTCCTCCTCAGgacataacaacaacaacaacaacaaacggCAACATTACCCAATTTGGTTCCTGGAATCCCTTCGAAACCACCGGATCGGGATCGCAGGAGGAATCAGGTAATAAGGTAATTAGTAGTCCCTCCTTGGATGTCATGCTTGAGTCTGATGatcatcaacaacaacaacaaattaGAAGTTGTCAAGCAAAGGAGGATGATTCTTTGGTGATTAATATTGGAAAATGGAGCCCATCCATGATCTTCACCTCCTTCAATAACTCACCATTAATTCCACAGGAACATCAATTTGCGGAATTTCAGTCCTTGGCAAAACTTTGGGAGGCCTGCAACAATCACATGATCTAA 990 0.3687 LQDQDQTPPPPPPCISTSDEVELNEIVPAEVVKSSRSGGGSCKRDRHSKIKTARGLRDRRMRLSLQVAKRFFGLQDMLGFDKASKTVEWLLNHSKDDIKKLAIHNHDTNTSSSTNSDQCEGVSGLDHEEVPPPLSEMKRSLSSSGRGIKGSGSTSTSSSSRKKSNNKSSNSSAVLHPIIGRESRQKARERARERTKEKEKMKSHKLMLLRPPPPQDITTTTTTNGNITQFGSWNPFETTGSGSQEESGNKVISSPSLDVMLESDDHQQQQQIRSCQAKEDDSLVINIGKWSPSMIFTSFNNSPLIPQEHQFAEFQSLAKLWEACNNHMI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1030 329 MobiDBLite consensus disorder prediction 106 251 - -
Sto12g1030 329 ProSiteProfiles R domain profile. 181 198 IPR017888 -
Sto12g1030 329 MobiDBLite consensus disorder prediction 106 121 - -
Sto12g1030 329 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Sto12g1030 329 MobiDBLite consensus disorder prediction 137 176 - -
Sto12g1030 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 283 IPR005333 GO:0003700
Sto12g1030 329 MobiDBLite consensus disorder prediction 1 16 - -
Sto12g1030 329 MobiDBLite consensus disorder prediction 1 49 - -
Sto12g1030 329 MobiDBLite consensus disorder prediction 214 251 - -
Sto12g1030 329 PANTHER TRANSCRIPTION FACTOR TCP18 33 283 - -
Sto12g1030 329 Pfam TCP family transcription factor 43 202 IPR017887 -
Sto12g1030 329 MobiDBLite consensus disorder prediction 181 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1030 Sto-Chr12 6419604 6420772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1030 43 195 TCP Transcription Factor Family AT3G18550 41.818 9.78e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto12g1030 TCP 7.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1030 - - gmx:100803669 186.422