Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1021 TTGCTCTCTTATCCTGTGAAACCATCATGTCCTTCCCTGATAAATCCATATATCAACGATGTCCTCCCTCCTTCTGCTCCTGATCTTACTGCAACTCGGATCTTCAATCGGTTGACTCGTCATCCATCTCTTCACACGTTGACAGATTCAGGTAAAACGATGGATCCGATGGACATCATTGGGAAATCAAAGGAAGATGCCTCCCTTCCTAAAGAACTCGACGTGTTTCCTACATGGTTAGATTTTGTTTTtctgattttgtttttttttttggataaggtCTCGCAGATTGTGCTTTTTCGCATAGAGTTTATAAACCTCGTTTCATCAGAGTCCAATGAAGTCTGTAACAGAGAGGATAAACGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGTTTTGGTGAGTACATTGAGGAAGTTTATGCAGCATACGAGCAGCATAAGATTGAGACCATGTGGAACCGGAATTTGTATTATCAAACCTGTGTCCGACTAAGGGTGACTGTCTTAAGGAGGCACCTGCAGCCTGGTGGACGGTTCCCTAAAGAAGGGCCCAAGCCAGTCAAAGTGGGGCTGCCATCTAGGACTTTCCTCTGGGTGTTTGCGGACTCTTTAAGAAGTGGCAAGTGGAGCAATGGGGCTGAGATGACTGAGGAAGAAGCATTAGTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAACGGTGGGGCCATTGCTCCCAAGCAGCCAGATGCTGACCAGACTTTAGAGAGCTAA 780 0.4487 LLSYPVKPSCPSLINPYINDVLPPSAPDLTATRIFNRLTRHPSLHTLTDSGKTMDPMDIIGKSKEDASLPKELDVFPTWLDFVFLILFFFLDKVSQIVLFRIEFINLVSSESNEVCNREDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKIETMWNRNLYYQTCVRLRVTVLRRHLQPGGRFPKEGPKPVKVGLPSRTFLWVFADSLRSGKWSNGAEMTEEEALVEQQRMFAEARARMNGGAIAPKQPDADQTLES 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1021 259 PANTHER PROTEIN DR1 HOMOLOG 208 258 - -
Sto12g1021 259 PANTHER PROTEIN DR1 HOMOLOG 54 157 - -
Sto12g1021 259 SUPERFAMILY Histone-fold 102 155 IPR009072 GO:0046982
Sto12g1021 259 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 103 133 IPR003958 -
Sto12g1021 259 Gene3D Histone, subunit A 97 245 IPR009072 GO:0046982
Sto12g1021 259 PANTHER PROTEIN DR1 HOMOLOG 208 258 IPR044255 -
Sto12g1021 259 PANTHER PROTEIN DR1 HOMOLOG 54 157 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1021 Sto-Chr12 6353628 6356647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1021 54 255 CCAAT-DR1 Transcription Factor Family AT5G23090 50.481 1.47e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto12g1021 CBFD_NFYB_HMF 7.8e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1021 K21751 - gmx:100807912 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1021 12 6353628 6356647 Sto12g1021 12 6353628 6356647 ECH