Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1019 ATGGCTGGCCGTAGAAGAAGGAGGCAACAGTTCAGCAGAATCCATGCTTTCTCATGTGGGAAAGCTTCGTTCAATGGTGAGCATTCACTGATAGGAGGACCTGGGTTTTCCAGAATAGTCTATTGCAACGACCCAGAATGTGTTGAGGAGGCTAACCTTATAAACTATGGTGACAACTATGTGAGAACTACTAAGTACACTCTGGCTTCGTTTCTTCCCAAGTCTTTGTATGAGCAATTCAGAAGGGTTGCCAATTTCTATTTCCTCGTATGTGCCATCTTGTCTTTCACCCCTGTTTCTCCTTACTCTGCTGTTAGCAACGTTGTTCCTCTTGTGGTCGTGGTCGGTGCTACAATGGGGAAAGAGATCGTTGAGGattggaggaggaagaagcagGATATTGAGATAAATAACAGAAAGGTTAAAGTACATTGTGGAGGAGGTGTTTTTGATTCTTCTAAATGGAGGGATCTGAAAGTTGGAGACATAGTAAAGGTTGAGAAAGATGAATTCTTTCCTGCTGATCTCATCTTGCTCTCCTCAAGCTACGACGACGCCATTTGCTATGTTGAGACCATGAATCTTGATGGGGAAACAAACCTTAAACTGAAACAAGCATTGGAAGAAACCTCAAAGTTCCAAGAAGATTCAAGCTTTCAAAATTTCAAGGCTATTATCAAATGTGAAGATCCCAATGCGAATTTGTACTCGTTTATCGGTAGTCTAGAGCTTGAGGATCAGCAGTACCCTCTTTCGCCTCAGCAGCTACTGCTTAGGGACTCAAAGCTGAGGAACACAGATTTCATATATGGTGTGGTAATCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGATCCTCCTTCCAAGAGAAGCAAAATTGAGAGACGGATGGATAAAGTCGTCTACTTTTTGTTCTTCATGTTATTTGTGATTGCTTTTGTCTGCTCCGTTTTCTTTGGGATTTATACAAGCCGTGACATTGAAGATGGTCACATGACAAGATGGTACCTTAGACCAGATGATACTACAATTTATTATGACCCAAAGAAAGCACCAATTGCTGCAATTTTGCAATTCTTGACTGCCCTTATGTTGTATAGTTACTTCATTCCCATTTCCTTGTATGTGTCAATAGAAATTGTGAAAGTTCTTCAGAGTATTTTCATCAACCAAGACTTGCACATGTACCATGAGGAAACTGATAAACCAGCACATGCTCGTACCTCGAATTTGAATGAAGAACTTGGCCAAGTTGATACCATTCTTTCTGATAAAACAGGAACTTTAACTTGCAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTGCTTACGGACGAGGCAttacagaagttgagagagCTCTAGCAAGGAAGAAAGGATCACCCTTAGAAAAAGTGTTGGCAGAAGAAGATGACAATATTGCTGAGATAGCTGAAGGAAAGCCAACTATTAAAGGTTTTAACTTCATGGATGAAAGGATTATGAATGGAAATTGGGTCAATGAGCCTCATGCAAAAACAATCCAAAACTTCCTAAGATTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAGTTTTATGAAAGGACACAAACAACCATTTCACTGCGCGAGTTTGATCCTTTGTCTGGAAGAAAGGTTGACAGACCCTACAAACTCCTAAATGTATTAGAATTCAGCAGTGCAAGAAAGCGTATGTCTGTGATTGTACGAGATGAGGATGGAAATCTATTGTTACTTTGCAAAGGGGCTGACAGTGTCATGTTTGAAAGACTAGCAAAGAATGGAAAGGAATTTGAAGAGAAGACTCGGGAGCACATTAATGAGTATGCCGATGCCGGTCTAAGGACATTGATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAACCAATTTAACAAAGAATTCACGGAGGCCAAGAACGTAGTGAGTGCAGAACGGGAGCAGATTGTAGAAGAAATAGCAGGAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCCGAATGCATCGACAAGCTAGCGCAGGCTGGAATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGgtTTGCTTGTAGTTTACTAAGACAAGGAATGAAGCAAATAATAATTAGCTCTGAAACACCAGAAATCAAGTCACTGGAGAAAGTGGAGGACAAGTCTGCTGCTGCTAAGGCAATTAAGGAAAGTGTTCTTCATCAGATAATGGAGGGAAAGGAACTGTTATCTGCATCTGACGAAAACTCTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTCACTTATGCATTGGAAGATGATGTGCAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGGCTAGTTAAGACTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGGGCGAACGATGTTGGAATGCTCCAGGAAGCCGACATTGGAATTGGTATTAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCGAGTGACATCGCAATTGCCCAATTTCGGTTCTTAGAGCGATTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCCATGGTCTGCTACTTCTTTTACAAGAACATTGTCTTCGGcttcactctcttcttcttcGATATCTATGCATCCTTCTCCGGGGAACCAGCCTACAATGATTGGTTCTTGTCTCTTTACAATGTATTCTTCACTTCACTTCCTGTGATAGCCTTAGGAGTGTTTGACCAGGATGTCTCTGCTAAACTATGTCTCAAGTTTCCATTACTATATCAAGAAGGTGTGCAAAATGTGCTATTCAGCTGGATTCGAATCCTCGGCTGGGCATTCAACGGGGTGTTATCTGCTACGATAATATACTTCTTCTGCATCAGCGCGCTGGAGGATCAAGCCTTCCGAAAAGGCGGGGAGGTCGTGGGGCTAGAAGAACTTGGTGCCACTATGTACACTTGTGTGGTGTGGGTGGTGAATTGCCAAATGGCATTATCCATCAATTACTTCACTTACATACAGCATGTGTTTATCTGGGGTGGCATTTGCTTCTGGTACATATTCCTTCTGGCATATGGAGCCATGAACCCTCTTATATCCACAACTGCCTATAAGGTCTTCATTGAAGCCTGTGCTCCTGCACCTTCTTACTGGCTCGTCACTCTGCTTGTTCTTGTTGCTTCTCTCATTCCATATTTCACTTTTGCTTCCATCAAAATGCGGTTTTTCCCTACTTACCATCAGATGATACAATGGATCAGAAGGGATGGGCAAGCTGAGGATCCCGAATACTGTAATGTGGTGAGACAGAGATCCATTCGCCACACGACAGTCGGCTACACGGCCCGGTTCGAAGCATCCAAACGTTTTGAAGAGAAGTTTGAGAGCAACCCTTGA 3591 0.4144 MAGRRRRRQQFSRIHAFSCGKASFNGEHSLIGGPGFSRIVYCNDPECVEEANLINYGDNYVRTTKYTLASFLPKSLYEQFRRVANFYFLVCAILSFTPVSPYSAVSNVVPLVVVVGATMGKEIVEDWRRKKQDIEINNRKVKVHCGGGVFDSSKWRDLKVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALEETSKFQEDSSFQNFKAIIKCEDPNANLYSFIGSLELEDQQYPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIERRMDKVVYFLFFMLFVIAFVCSVFFGIYTSRDIEDGHMTRWYLRPDDTTIYYDPKKAPIAAILQFLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDLHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGITEVERALARKKGSPLEKVLAEEDDNIAEIAEGKPTIKGFNFMDERIMNGNWVNEPHAKTIQNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQTTISLREFDPLSGRKVDRPYKLLNVLEFSSARKRMSVIVRDEDGNLLLLCKGADSVMFERLAKNGKEFEEKTREHINEYADAGLRTLILAYRELDEEEYNQFNKEFTEAKNVVSAEREQIVEEIAGKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKVEDKSAAAKAIKESVLHQIMEGKELLSASDENSEALALIIDGKSLTYALEDDVQDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCYFFYKNIVFGFTLFFFDIYASFSGEPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAKLCLKFPLLYQEGVQNVLFSWIRILGWAFNGVLSATIIYFFCISALEDQAFRKGGEVVGLEELGATMYTCVVWVVNCQMALSINYFTYIQHVFIWGGICFWYIFLLAYGAMNPLISTTAYKVFIEACAPAPSYWLVTLLVLVASLIPYFTFASIKMRFFPTYHQMIQWIRRDGQAEDPEYCNVVRQRSIRHTTVGYTARFEASKRFEEKFESNP 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1019 1196 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Sto12g1019 1196 SFLD C1.7: P-type atpase like 407 915 - -
Sto12g1019 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 491 701 IPR023299 GO:0000166
Sto12g1019 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1142 IPR023298 -
Sto12g1019 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1143 IPR032630 -
Sto12g1019 1196 Gene3D - 696 904 IPR023214 -
Sto12g1019 1196 Pfam Cation transport ATPase (P-type) 523 626 - -
Sto12g1019 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1189 - -
Sto12g1019 1196 SUPERFAMILY Calcium ATPase, transduction domain A 147 285 IPR008250 -
Sto12g1019 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 830 946 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g1019 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto12g1019 1196 Gene3D - 121 287 - -
Sto12g1019 1196 CDD P-type_ATPase_APLT_Dnf-like 58 1024 - -
Sto12g1019 1196 Gene3D - 545 674 IPR023299 GO:0000166
Sto12g1019 1196 SFLD p-type atpase 407 915 IPR044492 -
Sto12g1019 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1189 - -
Sto12g1019 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Sto12g1019 1196 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Sto12g1019 1196 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Sto12g1019 1196 SUPERFAMILY HAD-like 420 919 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1019 Sto-Chr12 6330212 6334876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1019 10 1187 Primary Pumps ATPases AT1G68710 71.299 0.0 1825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1019 K01530 K14802 gmx:100797039 2018.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1682 3 12870621 12878308 Sto12g1019 12 6330212 6334876 ECH
Sto12g1019 12 6330212 6334876 Sto12g1019 12 6330212 6334876 ECH