Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1014 ATGGGGAGCGATAGCGAAGCCGAGAAGTCGGCGCAGAAAGagaaggagaggaagaagatgcTTGCCTTGTGTCCAATTGCCAAACCCCTGGCTGGGAAGAAGCTCTGCAAGCGAACTCTGAAGCTTGTTCGTAGAGcttctgaacaCAAGTGCTTAAAGAGAGGGGTAAAGGAGGTGGTTAAAAGTATAAGGCGTGGTCAGAAAGGATTATGTGTTATAGCTGGGAACATAACACCTATTGATGTCATTACACATATGCCTATCTTATGTGAGGAGGCTGACATTCCATACATATATGTAACATCAAAAGAAGAGCTTGCTAGTGCAGGAGCAACAAAGAGACCAACTTGCTGCGTTTTGGTGATGACCAAGCCTGCGAAGGGGGAAATAGCTCAAGGGGATCAAGAAAAACTAAAGTCAGATTTTGATCAAGTTGTATCTGAAGTTAAGGAGGTTACAGCTGCGCTTTTTTGA 474 0.4177 MGSDSEAEKSAQKEKERKKMLALCPIAKPLAGKKLCKRTLKLVRRASEHKCLKRGVKEVVKSIRRGQKGLCVIAGNITPIDVITHMPILCEEADIPYIYVTSKEELASAGATKRPTCCVLVMTKPAKGEIAQGDQEKLKSDFDQVVSEVKEVTAALF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1014 157 PANTHER - 2 155 - -
Sto12g1014 157 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 155 - -
Sto12g1014 157 PRINTS High mobility group-like nuclear protein signature 25 38 IPR002415 GO:0003723|GO:0005730
Sto12g1014 157 PRINTS High mobility group-like nuclear protein signature 38 53 IPR002415 GO:0003723|GO:0005730
Sto12g1014 157 PRINTS High mobility group-like nuclear protein signature 55 65 IPR002415 GO:0003723|GO:0005730
Sto12g1014 157 PRINTS High mobility group-like nuclear protein signature 99 111 IPR002415 GO:0003723|GO:0005730
Sto12g1014 157 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 40 123 IPR004038 -
Sto12g1014 157 SUPERFAMILY L30e-like 21 131 IPR029064 -
Sto12g1014 157 PRINTS Ribosomal protein L7A/RS6 family signature 52 66 IPR018492 -
Sto12g1014 157 PRINTS Ribosomal protein L7A/RS6 family signature 71 84 IPR018492 -
Sto12g1014 157 PRINTS Ribosomal protein L7A/RS6 family signature 87 97 IPR018492 -
Sto12g1014 157 PRINTS Ribosomal protein L7A/RS6 family signature 97 111 IPR018492 -
Sto12g1014 157 Gene3D - 17 154 IPR029064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1014 51 151 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 26.471 3.44e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1014 K11129 - gmx:100305515 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1014 12 6306287 6307866 Sto12g1014 12 6306287 6307866 ECH