Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1005 ATGGAGGGTAATAAGGCTGAGAAATTAGGTGGAGTACCTTATACAACCTTCACGCAGGCACAGCATCTTCAATTTGCTTGTGCCACTCAGAAACCCATCTTCACCACAAGCCTCCTGAACATGCAAACCATGGAAGGCCATGAGGGACATGGCCATGTCTTGCCACATCTAGATCCTTCTCAAAGCTTGCATTATATTCCACTTCACTACTCACAACTTCATCTTCCCAGAAGTCTAACTCAAATCCCAGACTACAAATCCTCTCCAAACACATCCCACGACTGTAACAACAATGAAGCAGTGGCTGCTCTTGATgatcaaaagaaaagaagaatgcTTTCCAACAGAGAATCTGCACGCCGCTCACGAATGCGAAAGAAGCAACAAATAGAAGCACTTCAGTGTCAGGTGAATTATCTGCAAACCATGAATGATCAACTCTCTAGAAAGATCATCAACTTGCTGGAATGTAACCAGCAAATCCTTCAACAGAATGTTCAGCTTAAAGAGAAGGTTTCTTCTCTTCAAGTAGCTCTCTCGGACTTGTTTGTTCCTCTGCCACATGTTGAACAAACTAATCACATCCACAATGGCCCCATAGCAGAGCCTTCACAAGCATACCCTTCTGTCACCAAGCCAGCATGGCTACATGCCATTAAAAGTCCTATAAATGTAAAAGAATCTGGTTTGCATCCTGAGCTTTGCATCAATTCAAACAACTCTATAGCCTCACGTCCATGCCCATTAATTCCATATCCTGCAATTATAACATTCCATGATGCTTCATCTTTCTCCTTTACCCTGTCAAAAAGGCTTCGAGATAGTTCCATGGAACCACTTTTTGCATACATGTCCATTAAGATGATAACTGTGAACAAGCCCCCAGAACGCCCATTATGGCAATCTCATGAGCTTGATTTCCACTCGAAAGCATTTGACGGAATGTCTCAAGGGCTTCACTAG 963 0.4226 MEGNKAEKLGGVPYTTFTQAQHLQFACATQKPIFTTSLLNMQTMEGHEGHGHVLPHLDPSQSLHYIPLHYSQLHLPRSLTQIPDYKSSPNTSHDCNNNEAVAALDDQKKRRMLSNRESARRSRMRKKQQIEALQCQVNYLQTMNDQLSRKIINLLECNQQILQQNVQLKEKVSSLQVALSDLFVPLPHVEQTNHIHNGPIAEPSQAYPSVTKPAWLHAIKSPINVKESGLHPELCINSNNSIASRPCPLIPYPAIITFHDASSFSFTLSKRLRDSSMEPLFAYMSIKMITVNKPPERPLWQSHELDFHSKAFDGMSQGLH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1005 320 Coils Coil 116 150 - -
Sto12g1005 320 Pfam bZIP transcription factor 107 165 IPR004827 GO:0003700|GO:0006355
Sto12g1005 320 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 205 - -
Sto12g1005 320 Gene3D - 106 180 - -
Sto12g1005 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Sto12g1005 320 SUPERFAMILY Leucine zipper domain 107 163 IPR046347 GO:0003700|GO:0006355
Sto12g1005 320 Coils Coil 158 178 - -
Sto12g1005 320 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 205 IPR044521 -
Sto12g1005 320 CDD bZIP_plant_GBF1 108 156 IPR045314 GO:0003700|GO:0006355
Sto12g1005 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 154 IPR004827 GO:0003700|GO:0006355
Sto12g1005 320 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1005 Sto-Chr12 6251429 6253701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1005 98 218 bZIP Transcription Factor Family AT5G60830 46.875 9.57e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto12g1005 bZIP_1 6.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1005 - - aprc:113874797 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1005 12 6251429 6253701 Sto3g1659 3 12639482 12640123 CCT