Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0984 CTGGGAATTTTCAGGAGTCTTAAACTTTTCCTCTTTGTTGTTCATACAGAAGCCTATGATGCACTTGATCCATTTGGGAATATAACTATTAAATGGGATGTCATTAGCTGGACTCCAGATGGCTACCTTGCTGTTGTTTCGATGTTCAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGACATTAGGATGGAAATGGGCTAAAAAGGAAGTTATTTGGAACATGATGGGAGGCCAAACCACAGAGCAAGGAGACTGTTCAAAATTCAAAGGGAACATCCCACATTGTTGTAAGAAGGATCCAACGGTGGTCGACTTACTACCAGGAACTCCTTACAACCAGCAGATTGCAAATTGTTGCAGAGGGGGAGTACTAAGTTCATGGGCTCAGGACCCAACCACTGCAGTAAGTGCATTTCAGATTAGTGTGGGTTCTGCAGGAACCACTAACAAAACTGTCAAACTGCCAAAAAATTTCACCCTCAAAGCACCAGGGCCTGGATATACTTGTGGTCCTGCAAAGATTGTGAAACCAACTAAGTTTATTACTAATGACAAGAGGAGAACCACTCAAGCATTGATGACCTGGAATATTACCTGCACGTATTCTCAATTTCTGGCCCAAAAGACACCAACTTGCTGCGTTTCACTCTCATCTTTCTATAATGATACAATAGTACACTGCCCAACTTGCACCTGTGGCTGCCAAAACAGAACAGAACCTGGCAGTTGTGTAGAACCTAATTCTCCAATGTTAGCTTCAGTAGTATCACCTCCAGGCAAAGTTATAAATACACCTCTAGTCCAGTGTACCAGCCATATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTCAACTATAAAGAGTATTGGAGAGTGAAGATCACAATCACAAATTTCAATTACAGAATGAACTATACGCAATGGAACCTCGTCGCGCAGCACCCCAATTTTGATAATCTAACCCAAATTTTCAGCTTCAATTACAAGTCCTTAACACCTTATGAGGGCTTAAATGATACTGGCATGTTGTGGGGAGTTAAATTCTACAATGATTTGCTCACATCAGCTGGACGACTTGGGAATGTTCAATCAGAGCTCCTATTTCGAAAGGACAAATCAACCTTCACTTTTGATAAAGGATGGGCTTTCCCACGAAGGATATATTTCAATGGGGATAACTGTGTCATGCCACCTCCAGATTCCTACCCATGGCTGCCAAACACAAGTTCAAAACTAGTTTTGTCTATGCTTAGTACAATGTTAGCCACCTTAGCTTCTTTACTGATCTAA 1299 0.4196 LGIFRSLKLFLFVVHTEAYDALDPFGNITIKWDVISWTPDGYLAVVSMFNFQQYRHIQAPGWTLGWKWAKKEVIWNMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVLSSWAQDPTTAVSAFQISVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTKFITNDKRRTTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVHCPTCTCGCQNRTEPGSCVEPNSPMLASVVSPPGKVINTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFDNLTQIFSFNYKSLTPYEGLNDTGMLWGVKFYNDLLTSAGRLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTSSKLVLSMLSTMLATLASLLI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0984 432 Pfam COBRA-like protein 42 205 IPR006918 GO:0010215|GO:0031225
Sto12g0984 432 PANTHER COBRA-LIKE PROTEIN 8 430 - -
Sto12g0984 432 PIRSF COBRA 2 432 IPR006918 GO:0010215|GO:0031225
Sto12g0984 432 PANTHER PROTEIN COBRA 8 430 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0984 Sto-Chr12 6131550 6133865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0984 7 432 COBRA Gene Family AT3G02210 76.347 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0984 - - gmx:100811581 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0984 12 6131550 6133865 Sto12g0984 12 6131550 6133865 ECH