Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0978 ATGGCAGCAAAACTCTTGCATTCTTTAGCAGATGAAAACCCAGATTTACAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCATAATATTCTTACTGCTCGACGCATCACCCACAAGAGGCTTCCTCCTGGTAATTCCCACTTCACTGATGGTAGCTTTGAAAGAGATTCCAATTGCCTACACCATCCACTAACAGCAGCTGTAAGAACCTCCTTCTTCTCcGATGTGAACTTAGAGAAACAAAGAATCTCTACAGAGTCATCAATggcctctttctcttcttcttgttcctcaTCTGTGTCCTCTTTGGACTGTAAAGCTCAAGCAGAAACTGCCATTGACCGGATTATTTTCCCTGAAACTCCTTCAAGGGACCCAGTTATAAACCAAGCATCTGTCTCTCCCCATTTGGGACGGCAATCCCTTGAGCTGAGGGATGTGGTGAAGGATTCTATGCATAGAGACGCCAGAGGACTATTGTCAGTGAAAACTGCAACCAAAGAGGAAGCTGCTGTTATTGTTAGGAAGCATAGGGACTCCCCAAGACCTCTTCAACTGTCAAAATCTATTGAAGGGTCTTATGGGGTTGGGATAGATGGGAAGCAAAATGTGCCTCTTGACCTAAAGGAGTCCATTCGAGTGCTTGCTAAGCTTAGAGAAGCACCATGGTACTATAGTGAAGCTAGGGAACTTCCAAGATCATCATATGAAGTAAAAGAAGGCCACTGGCATCCAATCTCAAAGGATGCTCCTCGTTTTTCTTATGATGGAAGAGAAATAGGTCGTTTTTCTTTTGAATCGCGTGATACCATCAAATGCCCTCCAAAGCTCAAAGAGTTGCCTAGACTTTCACTGGACAGTAGGGAAAATTCATGGAGGACTCATAGCACTGATTCAAAATCTGCTCAGATTTCAAGAGGTTCCAATGGTGGCACCTCCACCTCTGATGACAAAGTCTCTACTGCATCACAATCTTTGGCGACCCAGAGCCGCCCTCCTAGTGTTGTAGCGAAATTGATGGGCTTGGAAGCTTTGCCAGATACTCATTCAAGTATGCCTGAAACTCGTGCAGCTCAAGATAGTGGTCAATTTTCAAGATTGTCAAGAAATGGACTTACCAGACccattagaggttctaattcCCCAAAAACCTCATTGAGAGACCCGACTTCACCACGGTGGAAGAATCCTGATTTGGTTATGAAACCCATTTCAAATTCAAGATTTCCCATTGAACCAGCACCATGGAAGCAGCAGGATGGAAATAGAAGCTCTCAGAAACCAAGTTTCAGGGCCATAAAAGCCCCAGCCAAAGCACCAGATTCATTTCCTTCTGTGTATAGTGAAATTGAAAAGAGATTGAAGGATCTTGAATTCAAACAATCAGGAAGGGATCTTAGAGCACTCAAACAGATACTTGAAGCAATGCAAGCAAAGGGGCTGTTACAGACTGAGAAAGAAGAAGCTTCAAATGCAGGAATTCAAAGAGACTACTACTATGAACCAAAATCTACAAATCTAATCCAGAATTCCAGGTCAGTAAGGCAACAAAACCAACCAGGAAACGATTTTCTATCTTCCACAATCAGGGGAGCTCACTCAGCAAGGAATTTTGAATCTCCAATTGTGATCATGAAACCAGCAAAACTTGTTGAGAAAACTGACCTTCCTGCTTCTTCAGTAATTCCGATAGGTGGCCTTTCCAGTTCCCATAGATTACAGAATGGTGTAACTGTAGACAACAAAAAGGTTCCATCTTCAAGTCGAATGGCTAAAGATCAGTCTTTTAGAACCACTCACAGGGATGCTGCTGCTAGTTCCACTGATAAGAAAGCAAGTAGTAGCAAGATTATGAGACCAGCACAATCTCAACCAAGGTCTCAACAATCTGCAAAAGAGTGTAGCTCAAGTTCAATAAAGAACTCTGGTTCTGTGAGCCCAAGATTGCAACAGAAAAAGTTGGAGTTAGAGAAGCGATCTCGTCCACCTGCTCCGCCATCCGACTCAAATAAACCCAGAAGGCAACCCAGTAAGAAGGCAACAGAATCAGGTTCCCCAGGTCGAAAACTGAGAGCTAAATTCTCCAACTTGCAGCACAGTGGTGATCCATTGAGTGAGATAAGTCATGAATCAAGAAGTTTAAGTTGCCAAGGGGATGAATCATCTCAGCAATCGGACAGCATCACTGTCTCAGAGTCAAAGATGGACGTGGAAGTCACCAGCAGTTTACAATCTGCCGAAACTTTTGATAGCCCAATCCCATCTATGAAAGCTATGAAGCAATTTGTTACAGGATCAATGCAGACGAAATCAACTCTGAGGTTGGATGAGGTTGAGTCAGTTTCAGAACTTGCAACAGATGCTCCAGAGCATCCTAGCCCTGTTTCAGTTCTTGATGGCTCAGCATACAGAGATGATGTAACATTTCCAATACAGCAGATATCCAGTGCTCCCAAAGCTGATGATGCTCAAGAATCAAGAGAAAATGGATATGGATATCAAAGGAGCCCTATAAATAATAGCCTAGTATTTAACAGCACGGGATCGGGAGAGATCAATCGCGAGAAATTGCAGAACATAGATCACCTTGTACAGAAGCTTAGACGGCTGAACTCTACTCACGATGAAGCTAGAAATGATTACATTGCATCCCTTTGTGAAAATACAAATCCAGACCACAGATACATCTCTGAGATTCTGTTAGCCTCAGGTCTTTTACTCAGAGATCTGAGCTCTGAATTGCTCACGTTTCAGCTTCACTCTTCGGGTCACCCTGTCAACCCTGAGTTATTCTTTGTCTTGGAGCAGACCAAGGCAAGTAGTTTGCTTCCTAAAGAAGAATGCATTCCGGAAAAAGTTGCTTGCTTGAAGCTTAAAACGGAGAAATCTCACAGGAAACTCATATTTGATGCTGTGAACGAGATTCTTGGTGTGAAGTTAGCCTTAATACTTGGCTCTTCCACTGAACCATGGTTGAAGCCTAGTAGACTCACAAAGAAAACAATGAGTGCACAAAAACTTCTTAAAGAACTGTGTTTTGAGATAGAAAAAATGCAAGCCAAGAAGCCAGAATCAAGTTTGGAAGATGAAGAGGATGGTCTGAAAAGTATATTGATTGAAGATGTGATGAATGGCTCAGAGAGTTGGACAGATTCTGATGGTGACGTACCTGGGGTTGTGCTGGATGTTGAAAGACTGATATTTAAGGACTTAGTTGATGAAGTTGTGATTGGTGAAGCAGGTGGCTTGCGAGTCAAGCAAGGGAGGCGAAGGAAGCAGCTATTTGGGAAGTAG 3312 0.4239 MAAKLLHSLADENPDLQKQIGCMTGIFQLFDRHHNILTARRITHKRLPPGNSHFTDGSFERDSNCLHHPLTAAVRTSFFSDVNLEKQRISTESSMASFSSSCSSSVSSLDCKAQAETAIDRIIFPETPSRDPVINQASVSPHLGRQSLELRDVVKDSMHRDARGLLSVKTATKEEAAVIVRKHRDSPRPLQLSKSIEGSYGVGIDGKQNVPLDLKESIRVLAKLREAPWYYSEARELPRSSYEVKEGHWHPISKDAPRFSYDGREIGRFSFESRDTIKCPPKLKELPRLSLDSRENSWRTHSTDSKSAQISRGSNGGTSTSDDKVSTASQSLATQSRPPSVVAKLMGLEALPDTHSSMPETRAAQDSGQFSRLSRNGLTRPIRGSNSPKTSLRDPTSPRWKNPDLVMKPISNSRFPIEPAPWKQQDGNRSSQKPSFRAIKAPAKAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQAKGLLQTEKEEASNAGIQRDYYYEPKSTNLIQNSRSVRQQNQPGNDFLSSTIRGAHSARNFESPIVIMKPAKLVEKTDLPASSVIPIGGLSSSHRLQNGVTVDNKKVPSSSRMAKDQSFRTTHRDAAASSTDKKASSSKIMRPAQSQPRSQQSAKECSSSSIKNSGSVSPRLQQKKLELEKRSRPPAPPSDSNKPRRQPSKKATESGSPGRKLRAKFSNLQHSGDPLSEISHESRSLSCQGDESSQQSDSITVSESKMDVEVTSSLQSAETFDSPIPSMKAMKQFVTGSMQTKSTLRLDEVESVSELATDAPEHPSPVSVLDGSAYRDDVTFPIQQISSAPKADDAQESRENGYGYQRSPINNSLVFNSTGSGEINREKLQNIDHLVQKLRRLNSTHDEARNDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPVNPELFFVLEQTKASSLLPKEECIPEKVACLKLKTEKSHRKLIFDAVNEILGVKLALILGSSTEPWLKPSRLTKKTMSAQKLLKELCFEIEKMQAKKPESSLEDEEDGLKSILIEDVMNGSESWTDSDGDVPGVVLDVERLIFKDLVDEVVIGEAGGLRVKQGRRRKQLFGK 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0978 1103 MobiDBLite consensus disorder prediction 302 338 - -
Sto12g0978 1103 Pfam Domain of unknown function (DUF4378) 898 1080 IPR025486 -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 571 742 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 353 406 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 571 599 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 358 397 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 819 840 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 704 742 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 414 433 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 288 339 - -
Sto12g0978 1103 Coils Coil 859 886 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 614 655 - -
Sto12g0978 1103 MobiDBLite consensus disorder prediction 784 806 - -
Sto12g0978 1103 Pfam DUF761-associated sequence motif 333 357 IPR032795 -
Sto12g0978 1103 PANTHER LONGIFOLIA PROTEIN 1 1101 IPR033334 GO:0051513
Sto12g0978 1103 PANTHER LONGIFOLIA PROTEIN 1 1101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0978 Sto-Chr12 6070251 6074753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0978 142 1102 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 48.129 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0978 - - gmx:100787391 1444.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0978 12 6070251 6074753 Sto12g0978 12 6070251 6074753 ECH