Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0977 ATGAATGAAGATTCAAGACAAGGGTATTATAACAAAGCAAAGCAAGAAGCTGGTACTGGTACAGGTACGGGTACAAATACGAGTACTATTAGCATAGACAAGTTCTCAACTTCAAGACAATGGCCGGGGTTTAGGAATCCTCGGATTGTGCGAGTTTCGCGGTCTTTCGGAGGGAAAGATAGGCACAGCAAAGTTTGCACCATCAGAGGACTAAGAGATAGAAGAATTAGGCTATCAGTGCAAACAGCAGTTCAGTTATATGAGCTTCAAGAAAGGCTTGGGGTAAGCCAACCGAGCAAGGTCATAGATTGGCTTCTTGAAGCCACAAAATATGACATTGAGAAGCTTCCACCACTTCAAATTCCTCAGGGACCTGCAAGTCTATCTTTGTCACAATTTGGAAGCCATGGGAGTGGATTATTgtttccttcacaaattcatgagTACCCTCCTTCTCATCAATATTCATCTTGCTTGCCCTTGCCTGTAGTGCCTGCTAATTCTCCTCAATTACTGTTTTGCCCTcctccttcatcttcttctgcCATGGTACCATCATTCTTTGCTCCACATGTtcagaataataatattaatgctacCTCATCATCAGCAGCGGCGGCAGATGATCAAGAAAGCGATCAAAGAGGACAATTCTTACTCAATCATGTTCAGTTCTTGAGCTCATCATCAAGTACTTCTCATCATTCTCAAGTAGCCATGCCTCCTCCCAACATTTCATGTCTTCACTCCATGAATTCGCCTTTGAAATTACAATTTAGTTCCAAGCTTCTGGATTCAGATAACGACAACAACAATAATCCTAGTCTGCATCAAGATAAGGGAAGTACTCGTTAA 855 0.393 MNEDSRQGYYNKAKQEAGTGTGTGTNTSTISIDKFSTSRQWPGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVQTAVQLYELQERLGVSQPSKVIDWLLEATKYDIEKLPPLQIPQGPASLSLSQFGSHGSGLLFPSQIHEYPPSHQYSSCLPLPVVPANSPQLLFCPPPSSSSAMVPSFFAPHVQNNNINATSSSAAAADDQESDQRGQFLLNHVQFLSSSSSTSHHSQVAMPPPNISCLHSMNSPLKLQFSSKLLDSDNDNNNNPSLHQDKGSTR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0977 284 PANTHER TRANSCRIPTION FACTOR TCP17 1 124 - -
Sto12g0977 284 PANTHER TRANSCRIPTION FACTOR TCP17 126 275 - -
Sto12g0977 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 124 IPR005333 GO:0003700
Sto12g0977 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 126 275 IPR005333 GO:0003700
Sto12g0977 284 MobiDBLite consensus disorder prediction 1 31 - -
Sto12g0977 284 MobiDBLite consensus disorder prediction 259 284 - -
Sto12g0977 284 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Sto12g0977 284 Pfam TCP family transcription factor 58 180 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0977 Sto-Chr12 6063442 6064515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0977 43 124 TCP Transcription Factor Family AT5G60970 82.927 5.80e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto12g0977 TCP 5.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0977 - - gmx:100804574 176.407