Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0938 ATGGAAATCACAGAAGAACAGAGAAAACGAGCCGAAGCGAATCGTTTAGCTGCCATTGCGAGACGACAGGCACTGTTAGAATCTCAACCACACAAAGATCCTTGGCATCTCTTCAAGTGCCGCAAGATCTCCCCCGAACACAATCCCAAGCCCACACCCATTCACCTCTCCGACCAACCCCAATCCGTCTCCCTCGAACCCCTTCCTCCCAAACCCTTGCCCCTTAAGTTCCAGGTTAGCCTCGAAATATGCTCTCCAGATTCATTTTCTGCAACCCCTCGACCCCTTCAGGGGAAACCCTATCCCGGAGAGGACCGGTGCTTGCAGAGACTAAACGATTCTTTGTCCAATGTCATGCCTTCACACTACACCCAAAATCACGGCGGTGGAAAGGCCTGCGTGTATAAGTTGAGGGATTACAATGCTGTCCTTAAATGTTTGAAGATTGCGGCGGACATAGAAGTTGCAGAAATTCCATGGGGAACTTTTAACGTCATTGAGAGGCTTTCACATTCCTTCGCTGCAGAGCGTTGGGTACCCTGCAGGCCTGAGCATTTGCCTGATGAGAAGGTTGATGAGTTAATTGGGAAGTTACCAAGAACATTACTGGATGCCTTGTTGCCTTTCCAAATGGATGGCTTACGATTTGGTTTGAGAAGGGGTGGCCGGTGTCTTATTGCAGATGAGATGGGCCTTGGGAAAACACTCCAGGCTATTGCTATTGCAGGATGTTTCTTGGATGAAGGTCCTGCACTTGTAGTTTGCCCAGCTGTTTTGCGTTTTACATGGGCAGAAGAATTAGAGAGATGGCTTCCCTGTTGCCTGCCTGCTGATATTCATCTGGGTAATTCTTACTGTTGA 861 0.4878 MEITEEQRKRAEANRLAAIARRQALLESQPHKDPWHLFKCRKISPEHNPKPTPIHLSDQPQSVSLEPLPPKPLPLKFQVSLEICSPDSFSATPRPLQGKPYPGEDRCLQRLNDSLSNVMPSHYTQNHGGGKACVYKLRDYNAVLKCLKIAADIEVAEIPWGTFNVIERLSHSFAAERWVPCRPEHLPDEKVDELIGKLPRTLLDALLPFQMDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFLDEGPALVVCPAVLRFTWAEELERWLPCCLPADIHLGNSYC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0938 286 Gene3D - 184 284 IPR038718 -
Sto12g0938 286 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 4 281 - -
Sto12g0938 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 276 IPR027417 -
Sto12g0938 286 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 4 281 - -
Sto12g0938 286 Coils Coil 1 23 - -
Sto12g0938 286 MobiDBLite consensus disorder prediction 42 67 - -
Sto12g0938 286 Pfam SNF2-related domain 224 271 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0938 Sto-Chr12 5821104 5822474 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Sto12g0938 SNF2_N 3.1e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0938 K25861 - vvi:100267344 400.208