Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0932 ATGTCAGAGCAGGACATAGATCCTTGGCGGTTGCTGTTCATTTGtttcttaattcttttttcAGGTAAAATTGTGGCCGGAGATTCTCTGGACACAGACAGAGAAGTTCTGCTTCAGCTTCAATCATACTTGAACAATCAAACTTTTGATGACAAAGGAAGATACACGACGTGGAACACAAGCAGTTCGAATCCTTGTGAGTGGTCGGGAATCTCATGCACCACCAGTCTCAACGGCGGAACGGCGAGGGTGGCCGGAGTAGACCTCTCCGACAGTAAAATCTCCGGCAAGATATTCCAGAACTTCTCCCTTCTCACACAGCTCACTCACCTGGACCTCTCCCAGAACACCctctccggcgagattccggcggaCTTGCGGCAGTGCCGGAATCTGGTATACTTCAATCTCTCACACAATATTCTTAGTGGTGAATTGAATTTGACTGGGTTCAAAAAATTGGAAACATTGGATTTGTCAGTGAATAGGCTTGAGGGGGATATTGGGTTTAATTTCCCTTCCATTTGTGATAATTTGGTCACTTTGAATCTCTCAGGGAATCACTTTAATGGTAGAATTGTTGAGTGCTTTGATCAGTGTTTGAAATTGcagtacttggatttgagtactaatAATCTAAGTGGGGATATATGGATGGGAATTTCGAAGCTGAGGAAATTTTCTGTGTCAGAGAATTTTCTAAGTGGGACTATTCCGGATTCGGTTTTTCCAGCAAATTACTGTCATCTTCAGATTCTGGACATTTCAGAGAATGCCTTCATTGGGAATGCTCCAAAGGAGGTAGCAAACTGTAAGAACTTGACGATTCTCAATCTTTCTGGAAATAACTTCACCGGAAGAATTCCTCTTGAAATAGGTTCGATCTCAGGGCTTAGAGCATTGTACTTGGGGAATAACAGTTTCTCAAGAGACATCCCAGAGGAAATTTTGAACTTGACAAATTTGGAATTCTTGGATTTGACTAGGAATCATTTTGGTGGGGAGATACAAGACATATTTGGGAAATTGAAGAATGTGAAGTACCTTCTATTGCATTCAAATTATTACACTGGAGGATTAACATCCTCAGGAATTCTCACATTACCAAACGTTGTACGATTGGATTTAAGCTACAACAACTTCACAGGTACACTCCCTATAGAGATCTCTCAAATGTCAAGCCTCAAGTACTTAATGCTGTCCTACAATAACTTCACTGGACCTATTCCACCTCAATTCGGAAACATGTCTCATCTTCAAGCTCTTGATCTATCCTTCAACAACCTTACAGGCTCAATCCCACCATCACTTGGGAACTTGACCTCTCTCTTATGGCTCATGCTTGCAAATAACTCTTTATCAGGTGAAATCCCTCGAGAGTTGGGGAATTGCACAAGCTTGTTATGGCTGAACCTTGCAAATAACCAACTCACTGGAAAATTCCCTCCTGAATTGACCAACATAGGAAGAAACGCCATGACCACGTTTGAGTCCAATCGGCAAAATGATAAGATGGCTGCTGGATCAGGTGAGTGTTTAGCCATGAAAAGATGGATTCCTGCTGATTACCCTCCGTTTAGTTTTGTGTATACTCTTCTCACGAGGAAGAACTGTAGAAGCATCTGGGATAGAATGCTTAAAGGGTATGGAATTTTCCAAGTTTGTAATGCTGGctcgttttcttcttcttctcaaatCTCTGGCTATGTTCAGCTGAGTGGGAATCAGCTTGAAGGTGAAGTTCCTCCAGAAATTGGGACGATGGTGAATCTGAGTATGTTACATTTGGGGCTTAATAAATTCTCCGGGAAACTCCCTTCAGAAGTAAACAGTTTGCCTCTTGTGGTTCTCAACTTGACGAGAAACGAATTTTCTGGGGAAATTCCTTGGGAAATCGGAAACATGAAGTGTTTACTGAATCTGGATTTGTCTTATAACAATTTCTCTGGGGTTTTTCCCACAAGTTTGAATTCTTTAACAGAGTTAAGCAAGTTCAACATTTCTTACAATCCCTTCATTTCTGGTCAAATCCCATCCTCTGGGCAACTCGCCACGTTTGAGAAATACTCATACTTAGGCGATCCACTCTTGGACCTCCCAAGCTTCATCGACAACGTCACTGACAGTAACAAAAACACAACCTCTGGCCACAAACCACTCACAAAACACACGAAACACTCTGTTTTCTTGGTCTTCTCTGCCATCACCCTGGCTTTCCTCGTCTTCGGTCTCCTCACTGTCATAATCTGTTTGCTCATCAAAACCCCCTCTGAAGAACCCCTcttacccaccaGGTTATCCGACACAGTCAAAGTCATCCGTTTGAACAAGACAGCATTCACACATTCCGACATCCTCAAGGCCACAGGAAACTTCTCAGACGACAGAATCATAGGCAAAGGAGGGTTCGGCACAGTGTACCGAGGCGTATTCCCGGACGGCACAGAAGTCGCCGTGAAGAAACTCCAACGGGAAGGGCTCGAAGGGGAGAAGGAATTCCGAGCCGAAATGGAAGTCCTAAGCGGGCACAGCTTCGGGTGGCCCCACCCGAACCTAGTCACGCTCCACGGCTGGTGCCTCGACGGTTCCAGCAAGATCCTCGTCTACGAATACATCTCGGGAGGCAGCCTCGAGGATCTCGTGACGGATAGGACGAAGCTGACGTGGAAGAAACGGTTGGAGATAGCGGCTGACGTGGCGCGCGCGTTGGTGTACCTCCACCACGAGTGCTTTCCGGCGATCGTACACAGAGACGTGAAGGCGAGCAATGTGATGTTGGATAAGGTGTCGGGGAAGGCGAAAGTGACGGACTTTGGGCTGGCGAGGGTGGTGGATGCAGGGGATAGTCACGTGAGCACGATGGTGGCGGGGACGGTGGGGTACGTGGCGCCGGAGTATGGGCACACGTGGCAGGCGACGACGAAGGGGGATGTGTATAGTTACGGGGTGTTGGCGATGGAGTTGGCGACGGGGAGGAGGGCGGTGGACGGCGGGGAGGAGTGTTTGGTGGAGTGGGGGAGGAGGGTGGCGGTGATGGGGTGGGGGTTGGTGGAAGGGGTGGAGGAGATGGCGGAGCTGTTGAGGATTGGGGTGAGGTGTACGGCGGAGATGCCACAAGCTAGGCCTAATATGAAGGAGGTTCTGGCTATGTTGGTCAAAGTTTCTAATGTGCATAGTgtagttaattaa 3189 0.4547 MSEQDIDPWRLLFICFLILFSGKIVAGDSLDTDREVLLQLQSYLNNQTFDDKGRYTTWNTSSSNPCEWSGISCTTSLNGGTARVAGVDLSDSKISGKIFQNFSLLTQLTHLDLSQNTLSGEIPADLRQCRNLVYFNLSHNILSGELNLTGFKKLETLDLSVNRLEGDIGFNFPSICDNLVTLNLSGNHFNGRIVECFDQCLKLQYLDLSTNNLSGDIWMGISKLRKFSVSENFLSGTIPDSVFPANYCHLQILDISENAFIGNAPKEVANCKNLTILNLSGNNFTGRIPLEIGSISGLRALYLGNNSFSRDIPEEILNLTNLEFLDLTRNHFGGEIQDIFGKLKNVKYLLLHSNYYTGGLTSSGILTLPNVVRLDLSYNNFTGTLPIEISQMSSLKYLMLSYNNFTGPIPPQFGNMSHLQALDLSFNNLTGSIPPSLGNLTSLLWLMLANNSLSGEIPRELGNCTSLLWLNLANNQLTGKFPPELTNIGRNAMTTFESNRQNDKMAAGSGECLAMKRWIPADYPPFSFVYTLLTRKNCRSIWDRMLKGYGIFQVCNAGSFSSSSQISGYVQLSGNQLEGEVPPEIGTMVNLSMLHLGLNKFSGKLPSEVNSLPLVVLNLTRNEFSGEIPWEIGNMKCLLNLDLSYNNFSGVFPTSLNSLTELSKFNISYNPFISGQIPSSGQLATFEKYSYLGDPLLDLPSFIDNVTDSNKNTTSGHKPLTKHTKHSVFLVFSAITLAFLVFGLLTVIICLLIKTPSEEPLLPTRLSDTVKVIRLNKTAFTHSDILKATGNFSDDRIIGKGGFGTVYRGVFPDGTEVAVKKLQREGLEGEKEFRAEMEVLSGHSFGWPHPNLVTLHGWCLDGSSKILVYEYISGGSLEDLVTDRTKLTWKKRLEIAADVARALVYLHHECFPAIVHRDVKASNVMLDKVSGKAKVTDFGLARVVDAGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSYGVLAMELATGRRAVDGGEECLVEWGRRVAVMGWGLVEGVEEMAELLRIGVRCTAEMPQARPNMKEVLAMLVKVSNVHSVVN 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0932 1062 Gene3D Ribonuclease Inhibitor 562 714 IPR032675 -
Sto12g0932 1062 SUPERFAMILY Protein kinase-like (PK-like) 774 1052 IPR011009 -
Sto12g0932 1062 SMART LRR_typ_2 416 439 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 635 658 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 105 129 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 440 464 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 588 612 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 368 392 IPR003591 -
Sto12g0932 1062 SMART LRR_typ_2 295 319 IPR003591 -
Sto12g0932 1062 Gene3D Transferase(Phosphotransferase) domain 1 872 1060 - -
Sto12g0932 1062 Gene3D Ribonuclease Inhibitor 243 360 IPR032675 -
Sto12g0932 1062 Gene3D Ribonuclease Inhibitor 361 516 IPR032675 -
Sto12g0932 1062 SUPERFAMILY L domain-like 570 691 - -
Sto12g0932 1062 SMART serkin_6 792 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0932 1062 CDD STKc_IRAK 798 1053 - -
Sto12g0932 1062 Pfam Protein kinase domain 793 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0932 1062 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Sto12g0932 1062 SUPERFAMILY L domain-like 222 483 - -
Sto12g0932 1062 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1056 - -
Sto12g0932 1062 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Sto12g0932 1062 PRINTS Leucine-rich repeat signature 108 121 - -
Sto12g0932 1062 PRINTS Leucine-rich repeat signature 416 429 - -
Sto12g0932 1062 ProSiteProfiles Protein kinase domain profile. 792 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0932 1062 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Sto12g0932 1062 ProSitePatterns Protein kinases ATP-binding region signature. 798 821 IPR017441 GO:0005524
Sto12g0932 1062 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1056 - -
Sto12g0932 1062 SUPERFAMILY RNI-like 84 289 - -
Sto12g0932 1062 Pfam Leucine Rich repeat 271 286 IPR001611 GO:0005515
Sto12g0932 1062 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Sto12g0932 1062 Gene3D Phosphorylase Kinase; domain 1 761 871 - -
Sto12g0932 1062 ProSiteProfiles Leucine-rich repeat profile. 418 441 IPR001611 GO:0005515
Sto12g0932 1062 Gene3D Ribonuclease Inhibitor 175 242 IPR032675 -
Sto12g0932 1062 Pfam Leucine Rich Repeat 178 200 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0932 Sto-Chr12 5777535 5780944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0932 51 1054 Receptor kinase-like Gene Family AT4G39400 33.304 1.92e-149 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Sto12g0932 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0932 - - gmx:100816573 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0932 12 5777535 5780944 Sto12g0932 12 5777535 5780944 ECH