Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0921 ATGTCCACCGCGCTTCCCTTAACCAATCTCAGCCCTCCGTTCCTCAACCTGTCACCCCACCTACCTTCCCCGCGCACTCCCTGTTTTCTTCTAGCGTCGCCGTCCTCAAAGATCGAATTTTTCAGCCCTGCTAACGTGCGCTCATCATCGTTATCCAAATCTAGCCGTTTGATTATCCTGGGTCCCGTCCGTGCTTTGATCTTGTCCGTTCTTGCTTTGGAGTCAAATTGTAGAATTTTTACATCTCGCGGTTGTTGGTGGGGTGGGGttttcgctatgGAGATTGGGGAGCTTAATTTGAACAAAGAATCTGGAGTTGGTGCTGGAAATACTAGTAAGAGTGGTGGTGATGGATTTATTGATAGAAGCAAAGTGAGAATTTTGTTGTGCGATAACGATTCCAAGAGTTCTGAAGAGGTGTTTACGCTTCTCTTAAAGTGCTCTTATCAGGTTACTTCCGTAAGGTCGGCAAGGCAGGTAATTGATGCACTGAACGCAGAGGGGCAAGATATAGACATCATACTTGCTGAACTTGACCTCCCTATGAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGGGACAAAGAACTGCGCCGAATCCCTGTTATAATGATGTCGGCACAAGATGAAGTATCCATTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAACTATGACTTTGATCTGGTAGCATCAGATCCTAGTGATGCTAATACGAACAGTACCACCTTGTTCTCTGATGACACTGATGATAAGTCCAAGAGGAGCACTAATCCAGAGACGGCAATGCCTATCCAACAGGAACATGAGTCTACTGTTGCTGATGCAGCTACCGCTGCTGTTACATTTGTCGAGATGCCTCCAGAGGTTCATGCATCAGAATATCGCCCAGATGTGCCTGGAATTAGTGATCGCCGAACAGGACATTTTTCAACTGGGCCAAAAAAGAGTGAACTAAGGATTGGGGAGTCATCGGCCTTCTTCACTTATGTTAAAGCAACCACAATGAAGAGCAACTCCCAAGGGGTCATTCATGTTGACCGTAATGCTGCTACACATTTGAGGATGGAAGATACAGATCAAGCTTGTCCTCAACAGGGGGTTAATGATCTTCAAATACATGAGAATGGAGAGACTTGTGAAAGTCATTCACAAGATGACTTACCTAGCAGTAGTAGTATCCCTGATTCTTTCTCCATTGAAAGGTCTTCTACTCCACCTGCATCGATGGAAATTTCACAGCAAAAACACTTCAGGGAAGAACATTTACCTCAAGGTGTGATCCATCCGAGGAATGGAACTCACAATTCTGAGCTTGAAGCATCTGGCATGCCTTCCCAGCATCATTATCCATATTATATTTCAGGAGTTGTTAATCCAGTTATGATGCCATCTTCAGCACAATTGTATCAAAAGAATCTCCAGGACCTGCAGACTCATGCTAGTACAGCTATGATTGCACAGTACAATCATCTTTCACAGTGCCCTCCTCATGCAAATGGAATGACGTCCTTTCCATATTACCCAATGAGTATATGCTTACAACCTGGACAGGTGTCTACAGTTCATTCATGGCCATCATTTGGAAGTTCAAGCTCTTCTGAAGTCAAATTAAGTAAAGTTGATAGGAGAGAAGCAGCATTAATGAAGTTTAGACAAAAAAGGAAAGAGCGGTGCTTTGATAAGAAAATTAGAGGGCCTATCAATTCTTTCCTGTTTATTGAGTGGACAACCGCCATTGGTCCTTGCTTGTTGAAGAGCTGTAGCCTCAGCATGATGAGTTTGTTCACCAATATTTCAATGACACCTATCCAATCTGCGCCCTCATCATTTGGAGTTCAGACCAACTCTTGCTTGTGTATTTGCTTGAATGCATCCTATTGA 1989 0.4359 MSTALPLTNLSPPFLNLSPHLPSPRTPCFLLASPSSKIEFFSPANVRSSSLSKSSRLIILGPVRALILSVLALESNCRIFTSRGCWWGGVFAMEIGELNLNKESGVGAGNTSKSGGDGFIDRSKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAELDLPMKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNPETAMPIQQEHESTVADAATAAVTFVEMPPEVHASEYRPDVPGISDRRTGHFSTGPKKSELRIGESSAFFTYVKATTMKSNSQGVIHVDRNAATHLRMEDTDQACPQQGVNDLQIHENGETCESHSQDDLPSSSSIPDSFSIERSSTPPASMEISQQKHFREEHLPQGVIHPRNGTHNSELEASGMPSQHHYPYYISGVVNPVMMPSSAQLYQKNLQDLQTHASTAMIAQYNHLSQCPPHANGMTSFPYYPMSICLQPGQVSTVHSWPSFGSSSSSEVKLSKVDRREAALMKFRQKRKERCFDKKIRGPINSFLFIEWTTAIGPCLLKSCSLSMMSLFTNISMTPIQSAPSSFGVQTNSCLCICLNASY 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0921 662 MobiDBLite consensus disorder prediction 273 306 - -
Sto12g0921 662 SMART REC_2 125 240 IPR001789 GO:0000160
Sto12g0921 662 MobiDBLite consensus disorder prediction 418 447 - -
Sto12g0921 662 SUPERFAMILY CheY-like 123 251 IPR011006 -
Sto12g0921 662 Pfam Response regulator receiver domain 127 238 IPR001789 GO:0000160
Sto12g0921 662 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 98 617 - -
Sto12g0921 662 PANTHER TWO-COMPONENT RESPONSE REGULATOR 98 617 IPR045279 GO:0009736
Sto12g0921 662 MobiDBLite consensus disorder prediction 413 447 - -
Sto12g0921 662 MobiDBLite consensus disorder prediction 328 352 - -
Sto12g0921 662 MobiDBLite consensus disorder prediction 333 348 - -
Sto12g0921 662 ProSiteProfiles Response regulatory domain profile. 126 244 IPR001789 GO:0000160
Sto12g0921 662 Gene3D - 125 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0921 Sto-Chr12 5705386 5711186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0921 115 600 Response Regulator Gene Family AT5G61380 49.648 2.16e-163 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto12g0921 Response_reg 2.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0921 K12127 - gmx:100799728 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0921 12 5705386 5711186 Sto12g0921 12 5705386 5711186 ECH