Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0904 ATGTTCATGGAGAGCCAGAGCCAGATTCAGCCACTCGTGTCATGGAATTCCAAGTGGGAAGTAAATGAAATTCCATTACCTCAAACTTACCAATTCCCTTCATATGACTTCTGTGTAAATGGTAACGGGTTTGTTGGACTGGATTGGCCATATGGATCTCCTGTCCCGTGGATGGAACCTGATCCTTTGTATGAAACTCTGGCCACTGAATCAACACCAACCTGGCAAGGCACTGATCACTTTTATGAAACGCAAAATGTTGCAGCCATTTGGAATGAAAGTGATGCAGGGTTTAGTTCAGACAATACTGTGTTTTTACTCTGCAAGAATGGAGAAAGTGGGAAGGAAATGATGAAGGAAGATCATAGGAAGGTTAAGAGATCATGCAGAGAAGAGAGAGGTAGCAATAGCAGTATGAGCACCAAGATGTTGTCAAGGAAGACTATTTCTCAGTACTTCTATATGCCCATTACACAAGCAGCCAGAGAACTGAACGTGGGGCTAACACTTCTCAAGAAAAGGTGCAGAGAATTGGGTATCAGAAGGTGGCCCCATAGGAAGCTCATGAGTCTTCAAACCTTAATCGACAATGTAaagGAACTAGGGAAGGAGGGGGGACAGGAAACAGAAGAGAAACTGAGGAATGCTATAGAGATATTGGCaaaggagaagaagatgatggaggAGATGCCAGATTTACAGCTTGAAGACAACACCAAAAGGCTGAGACAAGCGTGTTTCAAGGCCAACTATAAGAAGAGGAAGCTCATGGGGTCCATGGAATCTCAATATTCTTCTACCCTTGGTGGTTGTGCTACAATCAATGATGGCTCAAGGAATGAATTTAATATCGATGAAATAGTGCAGGACATCAAGTATTTGTTGCCGCCGGATCCTCCTCTACCCTCTTACAAAAATGCTTTGGCTAGTTTTGATTAA 939 0.4196 MFMESQSQIQPLVSWNSKWEVNEIPLPQTYQFPSYDFCVNGNGFVGLDWPYGSPVPWMEPDPLYETLATESTPTWQGTDHFYETQNVAAIWNESDAGFSSDNTVFLLCKNGESGKEMMKEDHRKVKRSCREERGSNSSMSTKMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIDNVKELGKEGGQETEEKLRNAIEILAKEKKMMEEMPDLQLEDNTKRLRQACFKANYKKRKLMGSMESQYSSTLGGCATINDGSRNEFNIDEIVQDIKYLLPPDPPLPSYKNALASFD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0904 312 PANTHER PROTEIN RKD4 58 265 IPR044607 GO:0003700
Sto12g0904 312 Coils Coil 210 230 - -
Sto12g0904 312 PANTHER PROTEIN RKD1-RELATED 58 265 - -
Sto12g0904 312 Pfam RWP-RK domain 144 191 IPR003035 -
Sto12g0904 312 ProSiteProfiles RWP-RK domain profile. 126 211 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0904 Sto-Chr12 5620428 5621648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0904 127 258 AtRKD Transcription Factor Family AT1G18790 71.970 1.72e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Sto12g0904 RWP-RK 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0904 - - gmx:100788666 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0904 12 5620428 5621648 Sto12g0904 12 5620428 5621648 ECH