Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0885 ATGGATTCTTTCAACTTCTTCAAAGGATATGGCAAAGTAAACGATAACCTCGAAGATCAGTCTCCCAAACCCAAATCGCCCAACCGAAAGCCCCTTGTCGCCGCCATTTCTCTCTTCGCCGTTCTCTTCCTCACTCTCACCATCGCTGCCACCCTCGGAGCTCTCATCCACTCCTCCAATTCCGAATCACCCAAACCCCAATCAGCCCCTTCCGTCACAAACGCCGCCGCCGAATCCATCAGAACCGTCTGCAACGTCACACGCTTCCCGGCCTCCTGCTTCTCCAGCATATCGTCATCCTTCCAAAACCCTAGCGATCCCGAATCCATTCTCAAGCTCTCCATTCAGGTCGCTCTCAACGAACTCTCCAACCTCTCTTCCTCACTCAGAACCTTAGCTTCGACCTCCAACGGCCCTGCTCTGGCTGACTGCAAGGATCAGATCGATGACGCGATGGAGGCGGCTCCCGGCGGCAAAGTGTTGACGGATTCCAAGATCAGCGATATCCAGACATGGATCAGCGCGGCGTCGACGGACCAGGAGACGTGTGTGGATGGATTGGAGGAAATGGAGTCGTCGGTGACTGGGgaggtgaagaagaagatgctGAGATCGAAGGAGTACATTAGCAACAGTTTAGCCATCGTCGCCAATATTCGCGACTTATTACAACGCTTCAATATGCCTCTGCATTGA 696 0.5201 MDSFNFFKGYGKVNDNLEDQSPKPKSPNRKPLVAAISLFAVLFLTLTIAATLGALIHSSNSESPKPQSAPSVTNAAAESIRTVCNVTRFPASCFSSISSSFQNPSDPESILKLSIQVALNELSNLSSSLRTLASTSNGPALADCKDQIDDAMEAAPGGKVLTDSKISDIQTWISAASTDQETCVDGLEEMESSVTGEVKKKMLRSKEYISNSLAIVANIRDLLQRFNMPLH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0885 231 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 218 IPR006501 GO:0004857
Sto12g0885 231 Pfam Plant invertase/pectin methylesterase inhibitor 79 215 IPR006501 GO:0004857
Sto12g0885 231 SMART PMEI_2 75 215 IPR006501 GO:0004857
Sto12g0885 231 CDD PMEI-like_3 82 219 - -
Sto12g0885 231 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 220 IPR035513 -
Sto12g0885 231 PANTHER PECTINESTERASE 1-LIKE 4 226 - -
Sto12g0885 231 PANTHER PECTINESTERASE 4 226 - -
Sto12g0885 231 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 219 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0885 Sto-Chr12 5533685 5534410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0885 1 231 Carbohydrate Esterase AT1G53840 36.220 1.64e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0885 - - jre:108995452 194.897