Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0884 ATGTCTGGCCAAAAAAGTAACAACAGAGCTTCAAACTTAACAGAGAATGAGGTTGATGATCTTTTGTCAAGGTTACAAGCACTGCTTCCAGGCCTGAACCGAAGGACCAACTCGAGGGTTTCAGTGTCCAAGATCTTGAAAGAGTCTTGCAGTCACATAAAGAGACTACAGAAAGAGGTGGAAGAACTAAGTGAAAGGCTGTCAGAGCTAATGGATTCTGCAGATATTAGTGATATAGACGAGGAGAGTCTTAGAAGATTTTTGCAACAATAA 273 0.4103 MSGQKSNNRASNLTENEVDDLLSRLQALLPGLNRRTNSRVSVSKILKESCSHIKRLQKEVEELSERLSELMDSADISDIDEESLRRFLQQ 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0884 90 Pfam Helix-loop-helix DNA-binding domain 18 57 IPR011598 GO:0046983
Sto12g0884 90 PANTHER DNA BINDING PROTEIN 1 90 - -
Sto12g0884 90 Gene3D - 7 86 IPR036638 GO:0046983
Sto12g0884 90 PANTHER DNA BINDING PROTEIN 1 90 IPR044172 -
Sto12g0884 90 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 72 IPR036638 GO:0046983
Sto12g0884 90 Coils Coil 46 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0884 Sto-Chr12 5531124 5531746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0884 1 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 48.101 3.09e-17 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto12g0884 HLH 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0884 - - gmx:100810266 97.8265