Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0879 ATGGGCAAGTCACCAGGAAAATGGATCAAAACCGTATTATTCGGGAAGAAGTCATCCAAATCAAATATTTCAAAAGGGAGAGAGGTAAATTATAAACTTGGTAATCAGAAAGAAGCATTGGTTGCTTCCAAGACAACAGAAACTGGTTTGGCTTTAGATCCAACGCCCTATACTATTGCCAGAAATGGGGAAGACTTAGAACTGGAGAATAAAGAAGCAGAAAATCTTTCGCCAGTGAATCAAGAAACAGATGTGGGAGATGTTCATCAAGATACACCCCGTGATCCAGAGACAATCAGGCTGGAGGAAGCTGCAACAAAGGCACAGGCTGCCTTTAGGGGTTATTTGGCTCGTAGGGCATTTAAGGCCCTAAAAGGCATAATAAGATTGCAAGCACTTATACGTGGGCATTTGGTTCGGAGACAAGCTGTTGCTACCTTATGTTGTATGTCTGGGATTGTCAAATTACAAGCACTTGCTCGTGGAGGAAGAGTTAGGCAATCTGATGTTGGTTACGAAATCCATGAGAAGTGCAATATTTTGAAGCTTCCGGATGGAAAGCATGCCAATCCAGTTGATATATCCACAAAATATGCAAAGCTGTCAACAAATACTTTCACCCGAAAGCTCCTTGCTTCATCTACTACAATAATGGCGCTGCGCCTCCAATATGTTCCTGGTGACCCAAATTCAGTCTTAAGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGATACCAATTCCCCAACCCAAGAAAATTCCAGACTCTAAATCTCAGAGAAAGCAAGGTAATATATCTACTGGGGAAGCTCACATGAGCAAGTCAAGACGTACCAACCGTAAGAGTCCAACTGCAAATTCTGACTTGGTCCCAGTACAAGTAAATCCTGAATTTGAAAAGCCAAAACGAAACCAGAGGAAAATATCAGGCCAACCTGCAGATCCAGCACAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAGCGTAGCCTGAGAAAGGTTCATAACCCTGTTGTTGAGAATGCTGTTGTTCAGCAAGAAGTTAAATCTGAGACCCCGAAGCAGCATTTGGAAAGGGCAACATTTACCTCGAGTCATGGTGTTTCAGAGCAAGGGGTTGTCAGTTCTAATGAGAAGAGCAATAAAGAAATAACATTGGCCATACCTGTACCCAATGTGCCTGATGTAGAAATTACACCTAGACCTTCAGTTAGCAAGGAGGTGTCTGAAATGCCAAGCAGTTATCAAGTGATAGTGGAAACAAAGCCTACAACAGAGAATACAagcaaagataaaaatatttctgATGAACAAGCTACAAATGAGCCAAAAGATCTACCAGAGACTGGCTGTAAAGATGAAAATTCTCCCCTAACAAATGGAAATTTGAATCATAAGGAAGATCCCACAGGCAATGAAAACCATAAAACCTCCTGGAGAGCCTCAATTCAAGGGAAACAGGATCGTGCAGAGAATGGTTTACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCAAAGTTGAGGGCACAAGGGTCCCCTAGGCTTGGACAAGACGGAGGCGAGAAAAACAACTCAGCCCGGCGACATTCTTTGCCATCTTCAACTAACTGCAAAATTAGTTCACATTCACCAAGGACACAGAGACCAGTTCAACCAGGTGGCAAAGGGGGGCACAGGGGTGATAAAACTGTCTCATCTAGAGAAGGGAACGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTGA 1767 0.4295 MGKSPGKWIKTVLFGKKSSKSNISKGREVNYKLGNQKEALVASKTTETGLALDPTPYTIARNGEDLELENKEAENLSPVNQETDVGDVHQDTPRDPETIRLEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCCMSGIVKLQALARGGRVRQSDVGYEIHEKCNILKLPDGKHANPVDISTKYAKLSTNTFTRKLLASSTTIMALRLQYVPGDPNSVLSWLERWSASHFWIPIPQPKKIPDSKSQRKQGNISTGEAHMSKSRRTNRKSPTANSDLVPVQVNPEFEKPKRNQRKISGQPADPAQENPQSELEKVKRSLRKVHNPVVENAVVQQEVKSETPKQHLERATFTSSHGVSEQGVVSSNEKSNKEITLAIPVPNVPDVEITPRPSVSKEVSEMPSSYQVIVETKPTTENTSKDKNISDEQATNEPKDLPETGCKDENSPLTNGNLNHKEDPTGNENHKTSWRASIQGKQDRAENGLQSSPTLPSYMAATESAKAKLRAQGSPRLGQDGGEKNNSARRHSLPSSTNCKISSHSPRTQRPVQPGGKGGHRGDKTVSSREGNGKVIQAEWRR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0879 588 MobiDBLite consensus disorder prediction 426 452 - -
Sto12g0879 588 Pfam Protein of unknown function (DUF4005) 488 565 IPR025064 -
Sto12g0879 588 SMART iq_5 100 122 IPR000048 GO:0005515
Sto12g0879 588 SMART iq_5 123 144 IPR000048 GO:0005515
Sto12g0879 588 MobiDBLite consensus disorder prediction 394 588 - -
Sto12g0879 588 Gene3D - 99 147 - -
Sto12g0879 588 MobiDBLite consensus disorder prediction 454 468 - -
Sto12g0879 588 MobiDBLite consensus disorder prediction 350 381 - -
Sto12g0879 588 MobiDBLite consensus disorder prediction 407 425 - -
Sto12g0879 588 Pfam IQ calmodulin-binding motif 125 142 IPR000048 GO:0005515
Sto12g0879 588 Pfam IQ calmodulin-binding motif 103 122 IPR000048 GO:0005515
Sto12g0879 588 MobiDBLite consensus disorder prediction 534 556 - -
Sto12g0879 588 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Sto12g0879 588 MobiDBLite consensus disorder prediction 250 334 - -
Sto12g0879 588 MobiDBLite consensus disorder prediction 358 381 - -
Sto12g0879 588 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Sto12g0879 588 PANTHER IQ-DOMAIN 5-RELATED 1 577 - -
Sto12g0879 588 MobiDBLite consensus disorder prediction 476 505 - -
Sto12g0879 588 PANTHER PROTEIN IQ-DOMAIN 31 1 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0879 Sto-Chr12 5502432 5506167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0879 1 588 IQD Protein Family AT1G74690 44.623 2.68e-128 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0879 - - gmx:100807118 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1520 3 11226707 11234334 Sto12g0879 12 5502432 5506167 ECH
Sto11g0985 11 10219694 10222833 Sto12g0879 12 5502432 5506167 ECH
Sto12g0879 12 5502432 5506167 Sto12g0879 12 5502432 5506167 ECH