Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0868 ATGGAAATGGGTACTATTGCTTTGGTTTTCTTGGTCATTTCGACGCCATTCTTCTTACCTTCGTCTCTTGCTCTCTCCTTAGACGGCCTTGCTTTGTTGGAAATCAAGAGCGTTTTGAATGATACTAGGAATGTCCTCAGTAACTGGCAAGAATCTGATGCATCTCCCTGTACATGGACTGGCATCACTTGTCATGCAGGTGAACAGCGAGTTAGCTCAATAAATCTGCCTTACATGCAACTCGGAGGCATTATATCTCCCAGCATTGGAAAACTTAGTAGACTGCAGAGACTGGCACTTCACCAGAACAGCTTACATGGAATCATTCCTACTGAAATCACCAACTGTACTGAGCTAAGAGCAATGTACTTGAGGGCAAATTATCTCCAAGGAGGCATACCATCAAATATAGGAAATCTTTCCTACTTAACCATACTAGATTTGTCAAGCAATTCCTTAAAGGGTGCTATACCATCATCTATTGGCCGCCTCTCACATTTGAGACTACTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGATTTTGGAGTTCTAAGCACCTTTGGGAACAACTCGTTTATTGGAAACTTAGACCTTTGTGGGAGGCAAATTGCAAAACCATGTAGAACCTCACTTGGGTTCCCTGTGGTGCTACCGCATGCTGAAAGTGATGAAGCTCCAGTCCCTACCAAAAGAACTTCTTCACATTACATGAAGGTGTTAATAATAAGTGCTATGTGTGCAATGGGCCTAGCACTTGTGATAATGGTTTCAATCCTTTGGATTTGTTTGCTGTCAAAGAGGGAAAGAGCTTCTAGGAGATACAAAAACATCAAGAAACAATTCTATCCAGAATCAAGTACGAAACACTTGACAGGCACAAAACTTATTACCTTCCATGATGATCTGCCATACCCATCTTCTGACATCATTGAAAAGCTTGAATCACttattgaagaagatgaagtagGATCAGGAGGGCTGGGTACTGTTTATCGAATGGTTATGAATGATCGCGCAACATTTGCTGTTAAGAGGATAGACAGAAGTCATGGCGGATCTGATCAAGCTTTTGAAAGGCAATTAGAGATATTGGGTAACACAAACCACATGAATTTGGTTAATCTGCGTTGTTACTGCGGCCTCCCTTCTTCAAAGTTTCTTATCTATGATTATTTTACCACTGGCAGCGTAGATGATCTATTGCATGAAAATGGTGAAGAAGAACAAATGTTGAATTGGAGTGCTAGGCTAAAAATAGCCCTGGGTTCTGCAAGAGGGTTGGCACACTTGCACCATGAATGCTCCCCAAGAATTGTGCATAGCAACATAAAATCCAGCAATATCCTGCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGTCTTTCAAAGCTTTTGGCTGATAGAGATTCTCATGTTACAACCGTAGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTGCAGAGTGGTAGAGCTACGATGAAGTCAGATGTGTATAGCTTTGGAGTACTACTGCTGGAACTTGTAACTGGAAAGAGACCTTCAGATCCTTCATTTGCAAAGGAAGGACTAACTATTGTTGGTTGGATGAATAAATTGGTGAGAGAGAAGAGACTGGAACAAGTGGTAGATAGAAGATGCTTCAGAGATGCAGATGCTGAAACTGTGGAGGCATTGATTGAGGTGGCAGCAAGATGCACAGATGCTAATCCAGAAGATCGTCCATCCATGAAGCATGTGTTGCACTTGCTGGAACAAGAAGTTATTACGTCTCCTTGTTCCAGTGAGTTTTATGAATCCCATTCCGATCATTGA 1833 0.4146 MEMGTIALVFLVISTPFFLPSSLALSLDGLALLEIKSVLNDTRNVLSNWQESDASPCTWTGITCHAGEQRVSSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPTEITNCTELRAMYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLSHLRLLNLSTNFFSGEIPDFGVLSTFGNNSFIGNLDLCGRQIAKPCRTSLGFPVVLPHAESDEAPVPTKRTSSHYMKVLIISAMCAMGLALVIMVSILWICLLSKRERASRRYKNIKKQFYPESSTKHLTGTKLITFHDDLPYPSSDIIEKLESLIEEDEVGSGGLGTVYRMVMNDRATFAVKRIDRSHGGSDQAFERQLEILGNTNHMNLVNLRCYCGLPSSKFLIYDYFTTGSVDDLLHENGEEEQMLNWSARLKIALGSARGLAHLHHECSPRIVHSNIKSSNILLDENMEPHVSDFGLSKLLADRDSHVTTVVAGTFGYLAPEYLQSGRATMKSDVYSFGVLLLELVTGKRPSDPSFAKEGLTIVGWMNKLVREKRLEQVVDRRCFRDADAETVEALIEVAARCTDANPEDRPSMKHVLHLLEQEVITSPCSSEFYESHSDH 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0868 610 Gene3D Transferase(Phosphotransferase) domain 1 396 602 - -
Sto12g0868 610 ProSiteProfiles Protein kinase domain profile. 319 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0868 610 Pfam Protein kinase domain 322 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0868 610 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Sto12g0868 610 Gene3D Phosphorylase Kinase; domain 1 281 394 - -
Sto12g0868 610 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Sto12g0868 610 SUPERFAMILY Protein kinase-like (PK-like) 305 591 IPR011009 -
Sto12g0868 610 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 601 - -
Sto12g0868 610 SUPERFAMILY L domain-like 28 209 - -
Sto12g0868 610 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 36 601 - -
Sto12g0868 610 Pfam Leucine rich repeat 118 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0868 Sto-Chr12 5447345 5450638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0868 24 599 Receptor kinase-like Gene Family AT2G35620 47.569 5.87e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sto12g0868 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0868 - - gmx:100803920 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0868 12 5447345 5450638 Sto12g0868 12 5447345 5450638 ECH