Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0863 ATGCAGGAAAATATACCCATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAGAGAAGGTCTCACCTCTGTGGCTGCAGAGGAGAGACTAACCATTTTTGGGTACAACAAGCTTGAAGAGAAAAAGGAGAGCAAATTTCTGAAGTTTTTGGGTTTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCAGCTGCTATAATGGCTATTGCACTTGCCAATGGAGGGGGGAAGCCCCCTGACTGGCAAGATTTTGTGGGTATCATCACTCTTCTTCTCATCAATTCAACTATTAGTTTTATCGAGGAGAACAATGCTGGTAATGCTGCAGCCGCACTTATGGCTCGTCTTGCTCCAAAAGCGAAGGTTCTTCGAGATGGTAGGTGGGATGAGCAAGATGCTGCGGTTCTGGTTCCTGGAGATATCGTCAGTATTAAACTGGGAGATATTATACCTGCGGATGCTCGCCTTCTTGAAGGGGATCCTCTGAAAATTGATCAGTCTGCACTTACTGGTGAGTCCTTGCCAGTGACAAAGGGTCCTGGTGATGGTGTGTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTTTGGTCATTGCCACTGGCGTACATACCTTTTTTGGGAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTGGGTCACTTTCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTATTGAGATTATTGTTATGTATCCAATCCAAGACAGAAAGTACCGTCCTGGAATTGATAACCTTCTCGTACTTCTTATTGGTGGAATTCCAATTGCCATGCCAACAGTTCTTTCAGTGACAATGGCCATTGGCTCACATAGGTTATCTCAGCAGGGAGCTATCACAAAGAGGATGACAGCTATAGAAGAGATGGCGGGCATGGATGTGCTTTGCAGTGATAAGACTGggactctaacattaaacaaacTTTCTGTTGACAAAAATCTAATTGAGGTTTTTGCAAAAGGAGTGGATCCGGATTCTGTTATTTTGATGGCAGCTCGAGCCTCCAGACTTGAGAATCAAGATGCAATAGATTCTGCCATAGTCGGGATGCTGGCTGATCCAAAAGagGCAAGAGCAGGTATCCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGAGGACAGCATTAACTTATATTGATGGTAATGGCAAAATGCATAGAGTAAGCAAAGGTGCCCCTGAGCAGATCCTTCATCTTGCGCACAATAAGTCAGACATTGAACGCAGAGTTCATGCGGTGATAGATAAATTTGCAGAGCGCGGTTTACGATCTCTCGCTGTAGCATACCAGGAAGTTCCAGATGGAAGAAAGGAGAGTGCTGGAGGCCCATGGCAGTTTATAGGTCTTATGCCTCTCTTTGACCCACCTAGGCATGACAGTGCAGAAACCATACGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAACTTGCTATAGGGAAGGAAACAGGTCGTCGATTAGGAATGGGAACCAACATGTATCCCTCATCTGCATTGCTTGGGCAGGATAAGGATGAAAGTATTGCTGCCTTGCCCATTGATGAACTGATAGAAAAGGCTGATGGATTTGCTGGTGTTTTTCCTGAGCACAAGTACGAGATCGTGAAACGCTTGCAAGCTAGGAAACATATTTGTGGAATGACTGGTGATGGAGTGAATGATGCACCGGCTCTTAAAAAGGCCGACATTGGTATAGCTGTTGCTGATGCAACTGATGCAGCCCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGCCTTAGTGTTATTATTAGTGCTGTTTTGACCAGCCGAGCAATCTTCCAACGAATGAAAAATTACACAATTTATGCAGTCTCAATTACAATTCGTATTGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAGTTTGACTTCCCTCCTTTTATGGTGCTAATCATCGCCATCCTAAACGatgGTACTATTATGACAATCTCAAAAGATCGAGTAAAACCATCTCCTCTCCCTGATAGCTGGAAGCTAGCAGAGATATTTACTACCGGAGTGGTGCTTGGTAGTTACTTGGCAATGATGACAGTTATATTCTTCTGGGCAGCATATAAAACCAATTTCTTCCCGCGAGTGTTTGGGGTCTCAACTCTTGAAAAAACAGCTCATGATGATTTCCGGAAACTCGCCTCAGCAATCTATCTTCAAGTTAGCACTATCAGTCAGGCCCTTATATTTGTGACTCGGTCTCGAGGCTGGTCATATGTTGAGCGTCCTGGTATATTGCTAGTGACTGCCTTTGTGGTTGCTCAGCTGATTGCTACTTTGATTGCAGTTTACGCAAACTGGAGCTTCGCGGCGATTGAAGGAATCGGTTGGGGTTGGGCTGGAGTAATATGGTTATACAACATCATATTCTACATCCCACTtgatttcatcaagttcttaaTTCGTTATGCTTTGAGTGGAAGGGCTTGGGATCTTGTAATTGAGCAGAGAATTGCATTCACAAGACAAAAGGACTTTGGAAAAGAACAACGGGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGATTACAACCACCTGACTCTAAGTTCTCTGAGCGCACGCATTTCAACGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCTGAAATTGCCAGGTTGAGAGAATTGCATACACTAAAAGGTCATGTAGAATCAGTTGTGAGGTTGAAGGGGCTTGACATAGACACAATTCAACAAGCATACACAGTGTGA 2820 0.4319 MQENIPIEEVFENLRCSREGLTSVAAEERLTIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWDEQDAAVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVDPDSVILMAARASRLENQDAIDSAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDGNGKMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLVTAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDSKFSERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0863 939 SFLD p-type atpase 297 625 IPR044492 -
Sto12g0863 939 CDD P-type_ATPase_H 20 831 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto12g0863 939 PANTHER CALCIUM-TRANSPORTING ATPASE 3 919 - -
Sto12g0863 939 Coils Coil 890 910 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 165 179 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 315 329 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 469 480 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 491 501 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 574 593 - -
Sto12g0863 939 PRINTS P-type cation-transporting ATPase superfamily signature 597 609 - -
Sto12g0863 939 SUPERFAMILY HAD-like 311 621 IPR036412 -
Sto12g0863 939 PRINTS H+-transporting ATPase (proton pump) signature 431 449 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 PRINTS H+-transporting ATPase (proton pump) signature 546 562 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 PRINTS H+-transporting ATPase (proton pump) signature 574 590 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 PRINTS H+-transporting ATPase (proton pump) signature 605 630 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 PRINTS H+-transporting ATPase (proton pump) signature 750 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 Pfam Cation transporter/ATPase, N-terminus 4 67 IPR004014 -
Sto12g0863 939 Pfam E1-E2 ATPase 116 294 - -
Sto12g0863 939 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 837 IPR023298 -
Sto12g0863 939 PANTHER PLASMA MEMBRANE ATPASE 1 3 919 - -
Sto12g0863 939 Gene3D - 118 202 - -
Sto12g0863 939 SFLD C1.7: P-type atpase like 297 625 - -
Sto12g0863 939 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 549 662 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 87 350 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g0863 939 Gene3D - 312 611 IPR023214 -
Sto12g0863 939 Gene3D - 327 474 IPR023299 GO:0000166
Sto12g0863 939 Gene3D - 888 939 - -
Sto12g0863 939 SMART Cation_ATPase_N_a_2 1 73 IPR004014 -
Sto12g0863 939 Pfam haloacid dehalogenase-like hydrolase 311 588 - -
Sto12g0863 939 SUPERFAMILY Calcium ATPase, transduction domain A 118 215 IPR008250 -
Sto12g0863 939 ProSitePatterns E1-E2 ATPases phosphorylation site. 317 323 IPR018303 -
Sto12g0863 939 Gene3D - 80 805 - -
Sto12g0863 939 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 20 796 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0863 Sto-Chr12 5416195 5421479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0863 3 939 Primary Pumps ATPases AT5G62670 93.177 0.0 1763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0863 K01535 - cpap:110819640 1718.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1501 3 11072393 11078578 Sto12g0863 12 5416195 5421479 ECH
Sto12g0863 12 5416195 5421479 Sto12g0863 12 5416195 5421479 ECH