Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0856 ATGGGGCACAAAAAGCGAAACCCTGCTCCACGTACCAAACAACCCGCGGCGGCTTCTCCGGTGGCACAATCTGGCATCGGCGGAGCCGCCGATTGTCCCACTTCAACCGAGCTCGAGTTGTGCATGAGTTCCAATGACACTCTTCATAGCGCGAGTAAGATCGAACTGCCTCACCATTACTCCACAATCAAGCTTGAATGTGAACGAGCCCTCACTGCGCTTAGGCGTGGTAACCACACCAGGGCTCTGAGGCTTATGAAGGAGTCGTGCTCCAGACACGAGAGCTCACCTTACTCCGCCTTGATTCAGCGAGTTCAAGGTACCGTGTGTGTCAAAGTAGCGTCGATTATTGATGACCCTAGTGCGAAGCAAAGGCATTTGAAGAATGCAATTGAATCGGCACGAAAAGCAGTTGAGCTGTCGCCCAGTTCTATTGAGTTTGCACATTTTTATGCAAATTTGTTATATGAGGCAGCAAATGATGCGCATGAGTACGAGCAGGTGGTGAAGGAGTGTGACAGGGCGCTCTCCATTGAAAATCCAATTGATCCTGCGAAGGAGAGTTTGCAAGATGAGAGCGAGCAGAAAATTCCAACAGCGGATACCCGTATAGCACATGTGCAGAATGAGTTGCGCCAGCTAATTCAGAAGTCAAACATAGCTTCCTTATCTACATGGATGAAAAAACTGGGTAATGGGGAGGAGAAATTCCGCTTGATTCCAATAAGGAGGGCTACGGAGGACCCGATGGAGGTGAAGTTGGTTCAATCTAGAAGGCCAAACGAGATCAAGAAGGTAACCAAGACACCTGaggagagaagaaaagaaattgaagtTCGAGTGGCTGCTGCAAGGATATTGCAGCAGAAGTCAGAGTCACCCCATTCCCAGAATGAAGGAAATAGGGATGATAGAACATTGGATTCATCTTCAGCATCTGGGCAGCGGCGGAAGTATGGACATGTGCGAAAAGCTGGATCTACATCTGAAAGGAGAGATTGGGTGAATTCGTATTGGAATTCgattagttttgatatgaaGAAGGAATTCCTTAGGATTAGGGTATGTGATCTCAAATCCCACTTTGGGTCTTCAAAGGATACTTCGCTGAATGACTTAATAGCAGAAGCATTGTCCTATGCTGAGGCTAATAAAATGTGGAAATTCTGGCTTTGCTGCCGATGTAATGAGAAATTTTCAGATTCAGAATCTCACATGCAGCATGTTGTACAGGAACACATGGGAAACCTCTTACCTAAAATGCAGAGACTCTTGCCTCAAAATGTTGATAATGAATGGATTGAGATGATTCAGAACTGTTCTTGGAAGCCTCTAGATGCATCTGCTGCAGTTAAAATGCTTGAAAATCAAGGAAATTGTAATGAATTTTCATTTCCTGAGGAGCATAATTGCTTTGGAGATACAACTAATTCTTACCCTGAAAAGGGACAGTGCCTCTACAATTGTACAACAGAAAGAAGTAACTATTGTAAATCTGCAGAAACTAATATTAGAGAAGATGTCGAGGTCCAAGGGTCTATAGCATATTCGCTTGCTGATGGTTGGCCATTATCTAATGACTCTGAGCGAGCCAAACTTCTTGAGAAAATTCATGCAGTATTAGATATGCTCATTAGACACAAATATCTCACCACTAGTCATCTTAGCAAGGTCATACAATTTACTGTGGATGAGATACAGGGTTTTGCTGCTGGATCTCAGCTTCTAAACCATGGTTTAGACCAAACACCAACGTGCATATGCTTTTTGGGAGCTTCACAGCTTAATAAAATTCTCAAATATTTGCAGGAACTATCTCATTCTTGTGGTTTGGGTAGATATGCTGAGAAAAGTAGTAGTCCCACAGATGATTTTCACATTGCCAATCAAGGTCCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCTTCATGCCTCCTTCTGGACGAGTGTTTAGTGCCCGTAGAAATCACTCCTGGTGCAGCTCAGTGTGCTGTCTTGGATGATGTGATTGCTCCAACTTCTAATGATGCAGTTTTACACAATACCGATCCTTTCTTATCTTGGATATTTTCAGGTTCATCTAGTGGGGATCAATTGACCTCATGGCTGAGAATGAAAGAAGATAAAAGACATCAAGGGATGGAAATTGTCCATACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTTTCCGAGAAAAAATGTGAGCGAATGAGTTATGAGGAAGCTCTGCAGACAGTAGAGGACCTTTGTCTAGAAGAAGGTAAGAAGAGGGAGAATTTCACTGAGTTTGTTCAGCGAAGCTATGAATCTGTTTTAAGAAAGCGGAGAGAAGAGCTTATTGAGCGTGAGAATGATGTAACCTATGCTAACGATAGGTTTGAGTTGGACGCCATAACAAATGTTCTGCAAGAAGCTGAATCCATGAATGTTAATCAATTTGGCTATGAGGAAACTTATGCGGGTGCACGTGACTTGGAGTCTGGTGAAGATGATGGATGGAGAATGAAGGACTATTTGTATCAAATGGATAGTTACATTGAAATTTCTATTCAGAAACTGAAAGAACACCTATCTGTGGAGCTTAGCAAAATTGATGCACGAATAATGAGAAATGTTACAGAGATGCAGCAGTTGGAACTCAAGCTTGAGCCTGTTTCGGCTCATGATTATCGAGCAATATTAGTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTAGAAGATTTGGCTGAGAAATATGCAAGGGACAAGTCCGATGCTGCAAGAGAAGCTTTTTTGGCTGAGCTTGCTCTTGATACAAAGAAGGTTGTTAAAGGAGGAAGTGACAGCACAAGACCTATGGAGAAgacaaaagataagaaaaagaataaagagaaCAGAAAAACAAGGGATTTGAAGGTTACAAGTGCTCATGAGCAGTTCATTCTTGACGCCACCATTCCTGATTCCTATCCAATTTCTCCTGATAATGGTCATCAAGATTCTGAGGTTCTTGTTTCTATGAATGGTGATGACTTGGAACAACAAGAAGAGGAATTCAGACGTAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGTTTCAACGGCGGATAGAAGATGAGGCTAAACAGAAGCACCTTGCTGAGAAACAAAGGAAATCCTCTGGGACATACTTAGATTACTCAGCTGATAAAGTTCTGGATGCTCAATTAAAGGCTGTTGCTGATGGTCCAGATGTACCCGAACATACGTTGGAGCAGTTGGCAAATGAGAATGGGTGCCCTAGCAACCTAGATGGTGTGCTTATTGCCACAGCTAATAGTTCTGCTGTGTCAAAGAAATCTTCACCTGATTCAGCAAATCAAAAGATTCATCATATGCTTCAACCAAATGTTAAGCAAGATCTGTCTATCAGAGGAGTTCCTGAGAATGATTTTCAGTTTCCTGAACAGCATATGGGAAAAAAGGGTAAACGGCACAAAAATGCTTCCAGATTGGTTGATGGAAAGCTTGATGCTGTCTCATTGGAAAAGGAGAACAATGAGGCTTGTTTTATATTAGCTGGGTCTGTCAACAGTAGATGTATTCTGCTCATACTTCTAGAAAAATTCCAACTTGCATCTGCTGAAGATATTTtctataatatgaaaactaaaTGGCGATGCTTTAATATGCCATCAGTGAGGGGAGACAATGGATTAAAGACTCTGAAAGAGTTGCAAGTGGAACATGATGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAAGCTGTACGCCAAAGTCTGGACACATATCAAGTAGGTCAAAAATTGCCTCCAGTTTCAAGGTTGAGAACACCAGAACGAGCTTCTTTGCAAGTAGATAATTTTGACGTTCCACTGGAGAACACAATCGAGAATGTAAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTTGGTGAATATAACTGCTTTCTCAATGTTATTATACAAGTAGCTCAGTCTTTGTGGCATTTAAGACAATTTCGGGAGGAATTTCTTGGCAGATCAAGATCTGAGCATGTTCATGTGGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCCATGGATCTTGCATCAAAGGATTGCAATGGAGAAGCAGTGGCACCTACATCGCTGAGGATAGCTCTAAGCAACCTATATCCTGATAGTAACTTCTTTCAGGAGGCTCAGATGAATGACGCTTCTGAAGTACTGGCAGTGATATTTGGCTGCCTTCATCAATCATTTACTCGTGACTCAAGTATTTCTGATACTGAATCAGCGGAAAGCAATTCCAAGGGATCTTGGGATTGTGCAAACAGTAATTGTATAGCACATTCACTCTTTGGAATGGATATTTTTGAGCGAATGAATTGCTACCATTGTGGTCTTGAGTCCAGACATCTTAAGTACACTTCTTTCTTTCACAATATAAATACCAATTCCCTCCGGACCATGAAGGTAATGTGTAGTGAAAGCTCCTTTGATGAGCTTTTGAATTTAGTGGAGATGAATCATCAGTTGGCTTGTGATCCAGAAGCTGGCGGCTGTGGCAAGCTAAACTACATCCATCACTTTCTTTCACAACCGCCTCATGTTTTTATGACAGTTCTAGGTTGGCAGAATACATGTGAAAGTGCTGATAATATAACAGCAACTCTGGCAGCCCTGAGCACTGAGATAGACATTAGTGTCCTTTATCGCGGTTTGGATCCAAAAAACACTCATAGCTTAGTTTCAGtgGTTTGCTACTATGGGCAACATTATCATTGCTTTGCCTATAGTCACGACCATGGAAAATGGATTATGTACGATGATAAGACAGTCAAGGTAATTGGTGGGTGGGCTGATGTTCTTACAATGTGTGAAAAGGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4941 0.4135 MGHKKRNPAPRTKQPAAASPVAQSGIGGAADCPTSTELELCMSSNDTLHSASKIELPHHYSTIKLECERALTALRRGNHTRALRLMKESCSRHESSPYSALIQRVQGTVCVKVASIIDDPSAKQRHLKNAIESARKAVELSPSSIEFAHFYANLLYEAANDAHEYEQVVKECDRALSIENPIDPAKESLQDESEQKIPTADTRIAHVQNELRQLIQKSNIASLSTWMKKLGNGEEKFRLIPIRRATEDPMEVKLVQSRRPNEIKKVTKTPEERRKEIEVRVAAARILQQKSESPHSQNEGNRDDRTLDSSSASGQRRKYGHVRKAGSTSERRDWVNSYWNSISFDMKKEFLRIRVCDLKSHFGSSKDTSLNDLIAEALSYAEANKMWKFWLCCRCNEKFSDSESHMQHVVQEHMGNLLPKMQRLLPQNVDNEWIEMIQNCSWKPLDASAAVKMLENQGNCNEFSFPEEHNCFGDTTNSYPEKGQCLYNCTTERSNYCKSAETNIREDVEVQGSIAYSLADGWPLSNDSERAKLLEKIHAVLDMLIRHKYLTTSHLSKVIQFTVDEIQGFAAGSQLLNHGLDQTPTCICFLGASQLNKILKYLQELSHSCGLGRYAEKSSSPTDDFHIANQGPEIKEKIVLNGDASCLLLDECLVPVEITPGAAQCAVLDDVIAPTSNDAVLHNTDPFLSWIFSGSSSGDQLTSWLRMKEDKRHQGMEIVHTLEKEFYHLQSLSEKKCERMSYEEALQTVEDLCLEEGKKRENFTEFVQRSYESVLRKRREELIERENDVTYANDRFELDAITNVLQEAESMNVNQFGYEETYAGARDLESGEDDGWRMKDYLYQMDSYIEISIQKLKEHLSVELSKIDARIMRNVTEMQQLELKLEPVSAHDYRAILVPLVKSYLRARLEDLAEKYARDKSDAAREAFLAELALDTKKVVKGGSDSTRPMEKTKDKKKNKENRKTRDLKVTSAHEQFILDATIPDSYPISPDNGHQDSEVLVSMNGDDLEQQEEEFRRKIELEEEEKKLEETLEFQRRIEDEAKQKHLAEKQRKSSGTYLDYSADKVLDAQLKAVADGPDVPEHTLEQLANENGCPSNLDGVLIATANSSAVSKKSSPDSANQKIHHMLQPNVKQDLSIRGVPENDFQFPEQHMGKKGKRHKNASRLVDGKLDAVSLEKENNEACFILAGSVNSRCILLILLEKFQLASAEDIFYNMKTKWRCFNMPSVRGDNGLKTLKELQVEHDEEERFQADLKKAVRQSLDTYQVGQKLPPVSRLRTPERASLQVDNFDVPLENTIENVNGGTLLGTGLKNEVGEYNCFLNVIIQVAQSLWHLRQFREEFLGRSRSEHVHVGNPCVVCALYEIFTAMDLASKDCNGEAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFGCLHQSFTRDSSISDTESAESNSKGSWDCANSNCIAHSLFGMDIFERMNCYHCGLESRHLKYTSFFHNINTNSLRTMKVMCSESSFDELLNLVEMNHQLACDPEAGGCGKLNYIHHFLSQPPHVFMTVLGWQNTCESADNITATLAALSTEIDISVLYRGLDPKNTHSLVSVVCYYGQHYHCFAYSHDHGKWIMYDDKTVKVIGGWADVLTMCEKGHLQPQVLFFEAVN 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0856 1646 MobiDBLite consensus disorder prediction 941 967 - -
Sto12g0856 1646 Coils Coil 1006 1046 - -
Sto12g0856 1646 Coils Coil 906 926 - -
Sto12g0856 1646 ProSitePatterns Zinc finger C2H2 type domain signature. 392 413 IPR013087 -
Sto12g0856 1646 CDD Peptidase_C19 1404 1643 - -
Sto12g0856 1646 Gene3D Cysteine proteinases 1304 1646 - -
Sto12g0856 1646 Pfam Protein of unknown function (DUF627) 69 180 IPR006866 -
Sto12g0856 1646 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1310 1645 IPR028889 -
Sto12g0856 1646 MobiDBLite consensus disorder prediction 296 311 - -
Sto12g0856 1646 MobiDBLite consensus disorder prediction 940 967 - -
Sto12g0856 1646 Pfam Ubiquitin carboxyl-terminal hydrolase 1311 1622 IPR001394 GO:0004843|GO:0016579
Sto12g0856 1646 SUPERFAMILY Cysteine proteinases 1310 1643 IPR038765 -
Sto12g0856 1646 MobiDBLite consensus disorder prediction 286 326 - -
Sto12g0856 1646 Pfam Protein of unknown function (DUF629) 335 850 IPR006865 -
Sto12g0856 1646 Gene3D Tetratricopeptide repeat domain 55 214 IPR011990 GO:0005515
Sto12g0856 1646 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1243 1646 - -
Sto12g0856 1646 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1184 - -
Sto12g0856 1646 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1184 - -
Sto12g0856 1646 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1243 1646 - -
Sto12g0856 1646 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0856 1 1643 C2H2 Transcription Factor Family AT3G47910 55.304 0.0 1704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0856 - - adu:107493676 2179.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0856 12 5371406 5379753 Sto12g0856 12 5371406 5379753 ECH