Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0855 ATGACCCTTAAGGGTGGCACAACCCAGGCCTGTGCAGCATGCAAATACCAGAGAAGAAAGTGCACTCCCGAGTGCCTTCTTGCTCCCTACTTCCCTGCAGACCAACCCAAGGTGTTTCAGAATGTCCACAAGTTATTTGGAGTCAGCAACATCGTCAAGATTTTAAAGAAATTGGAACCTAGCCAGAAGAAAATAGCTATGGACTCCATCATATGCCAAGCCAATTTCAGAGAAAAATACCCTGTTCATGGCTGTTGGGAGGAAATTTGCAGGCTACGTTACCAAATATGGTATGTGGAAGAAGAGCTTCGTGCTGTCCATCAACAACTGGAAATCCACAGACAACATTACCTTCAAAATCAATGTTCTTCATTGGTTGATGATGTGACTTCCCAGTTAGAGTTGGGGATGGTACCTCGCAATAATTATGCTTTCCCTCTCTTCAATCATACTACAAATCAACAGACATATAATACAGTgcctccttttcctttttctcagcAAGATTCTTATTGCAACAGCAATAGTGTGCCTTACAACTCCATTTACATGGATTCCAAGGATAATGTCACCACTAATCCTTTGTGGCTTCAGCAACCCTGCGAAGATAACAATAGCAATTCCATGGCCATGCATTCTCAATCACAGTTGGTTGCCTCAACTACTACTAGACACCAACAAGAAGTTCATGAAGAATATTACGATGAGATGAATCCATTTTTTGATACAATTGATGATAGACAATCATACATTTATTCTAAAGAGGCTTATGAATCAAGTTCTGAAGTATCATTGAAAGATACGAGAAATTGCATCAACCATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCCTGTTTCAGCCTTACCAGCGTCAACTGA 882 0.3968 MTLKGGTTQACAACKYQRRKCTPECLLAPYFPADQPKVFQNVHKLFGVSNIVKILKKLEPSQKKIAMDSIICQANFREKYPVHGCWEEICRLRYQIWYVEEELRAVHQQLEIHRQHYLQNQCSSLVDDVTSQLELGMVPRNNYAFPLFNHTTNQQTYNTVPPFPFSQQDSYCNSNSVPYNSIYMDSKDNVTTNPLWLQQPCEDNNSNSMAMHSQSQLVASTTTRHQQEVHEEYYDEMNPFFDTIDDRQSYIYSKEAYESSSEVSLKDTRNCINHVAENELKNAAACFSLTSVN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0855 293 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Sto12g0855 293 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Sto12g0855 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 269 - -
Sto12g0855 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0855 Sto-Chr12 5367957 5369471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0855 1 256 AS2 family AT3G47870 40.909 7.47e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto12g0855 LOB 5.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0855 - - lang:109357116 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0855 12 5367957 5369471 Sto12g0855 12 5367957 5369471 ECH