Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0853 atggaggATTTTCTGGACTTCAGCTTCGACCTTCAATCGAAATGGGTATCAACGGTGGCAAGCATATGGATCCAGTGCACCAGTGGGTCCCTTTACACTTTCTCCATCTACTCCGACACCCTCAAGTCCACCCAGCACTACGATCAGTCAACCCTCGACATCGTCTCCGTCTTCAAGGACATCGGTGTTAACGCCGGTGTCCTCTCCGGTATTCTATATGATTTCGCTGCCCTCCGAACAAGAGCTGGGCCTTGGCTGGTCCACCTTCTCGGTGCGGCCCAATGCTTTTTGGGCTATTTCCTCATGTGGGCCGCCGTCACCGGTGTCATTCCTCGACCGCCGGTGCCGTTGATGTGCTTGTTCATGTTCGTGGCCGCTCATGCTCAGAGTTTCTTCAATACTTCAAATGTTGTCACCGGTGTGCGTAATTTTCCTAACTATAATGGAACTATTGTGGGCATCATGAAGGGATTTCTTGGTCTTAGTGGAGCTATATTGATCCAAGTGTATCGAACAATATTCAAGAATAAGCCTACATCATATCTCCTGATGCTATCCCTCTTACCACCTATAAATACTTTGGTGCTTATGTGGTTTGTCAGAATCCACAACACCCGTGAAGGAGATGAGAGAAAGTATCTAAACATGTTGTCATTGATAGCTCTAGTTGTTGCTACATATCTCATGGCAGTCATAATTCTAGAGAACATTCTCAGTCTGCAAATATTGGTCAGCATCATTGTGTTCATCTTGTTGATAGTGTTGTTAGCCTCGCCTCTATTTGTTGCATTTAAAGCCCAGAAAAAGAGCTGTAATAATACTTCAGAGAGTTTTCCTGATGAGGCTTCCCCACTAATTGTTGAACCAGACCACTTAGATACAGAGAAGAAGGATGCAAGACATGATTCTGCCAAGTTTCCTATGCCCACAGATCGAAATATTGATACTAACAATCAGAGGGTTTTACAACTGGGAGAAAACAAGAATCTGTGTCAAGCTATGCAAACTGTGAACTTTTGGATTTTGTTTATTTCTATGGCATGTGGTATGGGATCAGGACTTGCAACAGTTAATAACATTGCTCAGATTGGAGGATCCCTCGGTTATACAAGCAACGAGACAGGTACCTTGGTTTCTCTATGGAGCATTTGGAATTTTCTTGGCCGTTTTGGAGCTGGCTATGTTTCTGATTATTTTTTACACACTAGAGGATGGGCAAGACCTTTGTTTATGTTCATCACTCTACTGATCATGAGCATTGGCCATGTGGTAATCGCCTCTGGACTGCCTGCAGCACTCTATGCTGGTTCAGTGTTGGTGGGTGTTTGTTATGGCTCTCAGTGGTCCCTAATGCCCACAATCACTTCTGAAATATTTGGTGTGGCTCATATGGGTAGCATATTTAACACCATCACCATAGCAAGTCCTGTTGGATCTTATATATTCTCTGTAAGAGTAGTTGGGTATATATATGACAAAGAAGCGTCAGAAGGGTATACATGCACTGGAATACATTGTTTTATGTTATCTTTTCTTATAATGGCATCTGCTACCATATTGGGTTCTCTGGCTGCTTTAGGCTTGTTTTTCCGGACAAAAAGCTTCTATGATCAGGTTATACTCAGAAGATTTCGATATCCTTCGAGGGAGTGA 1653 0.4319 MEDFLDFSFDLQSKWVSTVASIWIQCTSGSLYTFSIYSDTLKSTQHYDQSTLDIVSVFKDIGVNAGVLSGILYDFAALRTRAGPWLVHLLGAAQCFLGYFLMWAAVTGVIPRPPVPLMCLFMFVAAHAQSFFNTSNVVTGVRNFPNYNGTIVGIMKGFLGLSGAILIQVYRTIFKNKPTSYLLMLSLLPPINTLVLMWFVRIHNTREGDERKYLNMLSLIALVVATYLMAVIILENILSLQILVSIIVFILLIVLLASPLFVAFKAQKKSCNNTSESFPDEASPLIVEPDHLDTEKKDARHDSAKFPMPTDRNIDTNNQRVLQLGENKNLCQAMQTVNFWILFISMACGMGSGLATVNNIAQIGGSLGYTSNETGTLVSLWSIWNFLGRFGAGYVSDYFLHTRGWARPLFMFITLLIMSIGHVVIASGLPAALYAGSVLVGVCYGSQWSLMPTITSEIFGVAHMGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGYTCTGIHCFMLSFLIMASATILGSLAALGLFFRTKSFYDQVILRRFRYPSRE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0853 550 Gene3D MFS general substrate transporter like domains 213 525 IPR036259 -
Sto12g0853 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 545 - -
Sto12g0853 550 Pfam Nodulin-like 14 263 IPR010658 -
Sto12g0853 550 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 10 545 - -
Sto12g0853 550 Pfam Major Facilitator Superfamily 341 533 IPR011701 GO:0022857|GO:0055085
Sto12g0853 550 CDD MFS_Mch1p_like 13 521 - -
Sto12g0853 550 SUPERFAMILY MFS general substrate transporter 214 534 IPR036259 -
Sto12g0853 550 SUPERFAMILY MFS general substrate transporter 17 203 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0853 Sto-Chr12 5351271 5353718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0853 11 546 Nodulin-like Gene Family AT1G74780 56.307 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0853 - - lja:Lj1g3v0437880.2 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0853 12 5351271 5353718 Sto12g0853 12 5351271 5353718 ECH