Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0851 ATGTCGGAAGGATCTCCCTCTCCTCCACCGATTCCGACCGAACCCGGCGACCGATCCTCGCCGGAACCGGATTCCCAAAACCACATCTCCGATTCTCAGAACGGCGTTCCCACTTCTAAGGAGGAAACCACAGCCGCTCCCCCCGTCATCACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCAGCGTCTCGTCTCTATTCAACTGCGCAGCCGGCGATCCAACGGAAGGCCAAAGATGCGAAGAAGGAGCAGAGGCGGCCGGAGTCGCCGCCGCAGCAGCAATGCAGCAAGATCGTGACGCCGCTAGTGGAACCGCCCCCTCCTGCGCAGTTGCCTCGGTGGAACCTGCGGTCTATGTGGGAGTTAGCTTCTGTACTCAATTTCTTGCATGTATTTAGGCCTCTTTTGAATATCTCATTAGAATTCTCGGCGGAAGAGTTCGAGACTGCTCTCCTTACACCCAATGACACATTGAGTGATATACATATACCCTTGTTAAAGGCAATCCCTCCCATTACGCGAATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGGGAAGTTCCAATTGTTGCTTCGCATGGGGCGGAGGTTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTTGTCATCTTAAAAGCATTATGCGACATCCGTGTTGAGCAAGATGATATCCGAAGTTATATTGACAACTCACTCAGACATGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGGGGTGATGCATATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGCTATATCGGgaaacaagaaaaacagaagtagTTCAAGTGAAGAAAGGAAAACCAAAAGGTTCAAAGGTCCTCTCTAACACATCATACCAGTGGGAAGCCGTTGCTACCAACTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACTGAGGCTTCTCTAGGGAAAAAACTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGaggAAAGAGAGGTTGTTGAAAAAGCAACATAGACAAGCTCTtcttcttgataattttttgGGTGTTGATGGGCTTGCTCCTGGGCGTTCACTTCGTGATAGGAAACCTGTTACTTACACATTTGATGATTATGATCGGTCCATCAATGAGGCTATCAAAATAACTAAACAGAAACAGCCATCCCCAGAACCTATACCTAGGAGAGAAATTGCAGGAAAAGCTGAAACTTTGACTAATGGTAGAAGGAGTGGCCCTTCACATGCCTCTGAACATCTAAGTTTTGGTATCCCATCTCCAAAATCATCCGATTTTGATGATGCTGAGGAAGAGCATAAATCTGAATCATTGGACCGAAGCAATCGACGTAGACAGAGGCCTATGCGGTATTCAGAGAAGGAGTTTGTAGAAGCATTATCAGATAATGAGGCAGACTTCGACAGTGATGATGATATTGTTGGGGAAGCTGTATATGATGAAGAATATCTCAGGAAACGTAAGCAGAGAAGGAACCTTTCTAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGACGAAGACaatgttgaagaagaagaagaagatgatgaagaagaagattccTTAAGTATCAGTGAAGATAGTGACAAGCCCCGTAAAGCTAAGCAATTGCCAGGCCGTACTAGGAGGGAAACTAAACTCAGGTCTGTAGATGACATTCAACTAGGTCTACGGCGCAGCAAGAGGGCCACCAGAAACCGTATCAATTACCGTCAATATGAGGTGTCAGAATCAGAGCCAGAGTCTACAAAACCTGAGAAATCTAATGCTTCAGATGATCACTCAGTTCCCAGTGAGAATGGGGATTACATGATGGAAAATGAAGATTCCGACGGCAATTCGGATGGCAATGATGGTGAAGATCAGGAAATGAAAGCAGACAATGAGGCCGAAGCTTATCCTGCAGTAGAAGAGAAAGAACAAGCACAGCCTCCCGAAAAATTAAGTAGTCCTAATCAGGAGGAAGTTGAGGGCACGATGAAAAGACGTTTCCTCGATTTAAATGAGCTCGCCCCCAGCTCAGGTTTTGATGATGGTCCAAGCATGATAACAAAAGATGAAGATATTGATCCTCAAGCTTCCCCCTCTACATGA 2217 0.4425 MSEGSPSPPPIPTEPGDRSSPEPDSQNHISDSQNGVPTSKEETTAAPPVITTRSNRPSRACTIRAASRLYSTAQPAIQRKAKDAKKEQRRPESPPQQQCSKIVTPLVEPPPPAQLPRWNLRSMWELASVLNFLHVFRPLLNISLEFSAEEFETALLTPNDTLSDIHIPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGEVPIVASHGAEVEVYKSLDPGVRVVILKALCDIRVEQDDIRSYIDNSLRHGVQLSTFRKERIGGDAYGISYWYEDDPIIGHRLYRETRKTEVVQVKKGKPKGSKVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEASLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKQKQPSPEPIPRREIAGKAETLTNGRRSGPSHASEHLSFGIPSPKSSDFDDAEEEHKSESLDRSNRRRQRPMRYSEKEFVEALSDNEADFDSDDDIVGEAVYDEEYLRKRKQRRNLSSSSEGDDEYQWDEDNVEEEEEDDEEEDSLSISEDSDKPRKAKQLPGRTRRETKLRSVDDIQLGLRRSKRATRNRINYRQYEVSESEPESTKPEKSNASDDHSVPSENGDYMMENEDSDGNSDGNDGEDQEMKADNEAEAYPAVEEKEQAQPPEKLSSPNQEEVEGTMKRRFLDLNELAPSSGFDDGPSMITKDEDIDPQASPST 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0851 738 MobiDBLite consensus disorder prediction 659 685 - -
Sto12g0851 738 Pfam DDT domain 128 173 IPR018501 -
Sto12g0851 738 MobiDBLite consensus disorder prediction 439 490 - -
Sto12g0851 738 PANTHER REMODELING AND SPACING FACTOR 1 38 731 IPR028938 GO:0006355|GO:0031213
Sto12g0851 738 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 38 731 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 540 565 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 72 108 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 1 60 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 613 634 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 566 600 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 464 490 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 19 60 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 526 738 - -
Sto12g0851 738 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0851 Sto-Chr12 5336333 5343503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Sto12g0851 DDT 6.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0851 - - gmx:100795519 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1490 3 10977668 10981922 Sto12g0851 12 5336333 5343503 CCT
Sto12g0851 12 5336333 5343503 Sto12g0851 12 5336333 5343503 ECH