Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0844 ATGGATCCTCCTCTCATCAGCGACTCTACATTCTCTCCCGCTAACCCATCTGCTTATTCTCTCGCCGAGATTTGGCCTTTCACTGGGGACCCCACTCCCTCTTCTGGATTGGGCCTCCGGATGGCCCATTTAGGTCACAATTTCCCCGCCTTCACCGATAATTCCTTGCATCGAGATGCCTCCGCTGAGGAGTCCACCGTCACGGAGCATAGCGGCGGCGGAGGAGGCGCTGCTGCTGCTAGTGCCAGTGGAAATCAAAGGAAGAGGAAGGATACCAGCTCTGAAGACGAGTCCTCAAAGATGGTTTCCATGAGTAGTGCCAATGACTTGAATGATTCTGGCAAAAAACGGGTAAAGTTAGGTGGATCCAAGGATGAAAATAGTGGTTTGAAGGCTGAAGCTGAAGCAAGTTCAGCAGCTGGTAGCAAGTCGGCTGAACAAAGCACTAAACCTTCTGAGCCACCTAAGCAAGACTATATACATGTGAGAGCAAGAAGAGGTCAAGCTACCGACAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAAAAGATCAGCGAGAGGATGAAAATTCTTCAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATCAATTATATTCAATCACTGCAGCGGCAGGTTGAGTTCCTTTCAATGAAGCTTGAAGCAGTTAATTCAAGAATGAATATGAATCCAACTATTGAAGGGTTCCCTTCAAAAGATCTTGGCGCTCAGCCATTTGACGTTGCCGGAATGATATTTGGATCACAAGCAGGCAGGACGTATGCTCAGGGAACACAACCTGGATGGTTGCATATGCAGCTAGGTGGTGGTTTTGAGAGAGCAACAGCTTCTCTAGATTCTGAGGTATCATACATTTTAGAAAAAGGTTCCGAGAACCCATTGTCTGCTTCAGGAACATTCACCCTTCCTTTTCCTGCCATATCAAGAGCCTCCATCTGCACTGCCGCCTTCTCGGCCTGCAAGCGAGTAATCATGGCCATTGCGTTGTTAGCAGCAATGGCTGAAGCACTTCTTTCTTCATCTAGCTCCATGTACAAAGCCATGAGTGACTTTCTATCAAAACGAACTTGCTTGTTCAAATGGTTTAAGAGGGGATCATCTGCTTCATTTGAAATACTCCCCTCAGTAGAATCAGGGGTAAATCCAGTTTTTTCCAATCCCGATCTCCAGTTGATCCTGAAAGCCCATCTGGGACTGTTGGCAGAAAAATTTGTATATGGGATTCCAAAGAACTTATTGCCCTTTGCAGAATATGGGGTTTTATTCTCCTCGTTTAAATCATCACCTGCCATTAGAGGCACAGAAGCAGCTTTGGCATCTTCCCTTACTGTAAAGAAATCTCAGTGA 1395 0.4631 MDPPLISDSTFSPANPSAYSLAEIWPFTGDPTPSSGLGLRMAHLGHNFPAFTDNSLHRDASAEESTVTEHSGGGGGAAAASASGNQRKRKDTSSEDESSKMVSMSSANDLNDSGKKRVKLGGSKDENSGLKAEAEASSAAGSKSAEQSTKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIEGFPSKDLGAQPFDVAGMIFGSQAGRTYAQGTQPGWLHMQLGGGFERATASLDSEVSYILEKGSENPLSASGTFTLPFPAISRASICTAAFSACKRVIMAIALLAAMAEALLSSSSSMYKAMSDFLSKRTCLFKWFKRGSSASFEILPSVESGVNPVFSNPDLQLILKAHLGLLAEKFVYGIPKNLLPFAEYGVLFSSFKSSPAIRGTEAALASSLTVKKSQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0844 464 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 291 - -
Sto12g0844 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Sto12g0844 464 MobiDBLite consensus disorder prediction 47 159 - -
Sto12g0844 464 MobiDBLite consensus disorder prediction 112 131 - -
Sto12g0844 464 Gene3D - 165 242 IPR036638 GO:0046983
Sto12g0844 464 Coils Coil 215 235 - -
Sto12g0844 464 MobiDBLite consensus disorder prediction 140 154 - -
Sto12g0844 464 CDD bHLH_AtBPE_like 158 241 - -
Sto12g0844 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 238 IPR036638 GO:0046983
Sto12g0844 464 SMART finulus 174 224 IPR011598 GO:0046983
Sto12g0844 464 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
Sto12g0844 464 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 291 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0844 Sto-Chr12 5293007 5297431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0844 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 57.432 1.47e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto12g0844 HLH 4.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0844 - - zju:107418528 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0844 12 5293007 5297431 Sto12g0844 12 5293007 5297431 ECH