Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0842 ATGGTGTCAACTTCTCAGAAGAAAAGCATTCACTCCCTCCTCGCTGCCAACCTTAGTAAGCTCAGcataccttcttcttcttcctcctcctccacaTCCAATCACGATTTCGACTTTTGCCCTTTCTCCTCCGACGATCCCAATCCATCTCCATCCACTGCCATTCTCGGGAGCCCACAAGTTATTCAGAGTAGGTCCCACTCCTTTGTGGGCCCCTCCCCACGATTCGCCCAATCCTCCAATTCCCTCTTCTTGCTTAACGAAGAACTCGATTCCCAGAGCGAAGACGACGCTGAAGAAACTGATGATGATCGGAGTAGGTTAGGAACTGATTTTGCAGTTGACGGAATCCATGTGGGCGCGAGTCATGACCTTGCAGAGAAAGTGGCCAGCAAAATTGGACCTGGAGATTTTCAGATTTTGAGAGTTGTGGGGCAGGGCGCGTTCGGGAAGGTATTTCTGGTGAGGAAAAAGTGTGATCCATCTGATGGAGCGGATGGTGATGGTATTTTTGCAATGAAGGTGATGAGGAAGGAGACGATCATAAAAAAGAATCATGTGGATTATATGAAAGCCGAAAGAGATATTCTGACCAAAGTGGTTCATCCTTTTATCGTTCAGCTCCGGTACTCTTTTCAGACCAAatctaaattatatttgatCTTGGACTTCATTAATGGAGGACACCTCTTTTTTCATCTGTATCGGCAGGGTATCTTCAGTGAGGATCAGGCAAGGATTTATACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAGCGGAATCGTGCATCGGGATCTTAAACCTGAAAATATACTTATGGATGCTGAAGGGCATGTAATGCTAACTGATTTTGGAATGGCAAAGGAAATTGATGAATCGGGCAGATCCAACTCTTTGTGTGGAACCATAGAATATATGGCTCCAGAAATCATACTGGCTAAAGGCCACAACAAGGAGGCAGATTGGTGGAGTATCGGTATACTGTTGTATGAAATGCTAACAGGAAAGGCCCCATTTACTCATGCTAACAGAAAGAAACTTCAAGAGAAAATTGTTAAAGAGAAAGTGAAACTTCCACCAATGGTTAGCAGTGAAGCTCACTCTTTGCTTAAAGGATTGCTGCAAAAAGATCCGTCAATAAGGTTAGGCAATGGACCAAATGGAGATGAACAGATCAAAACTCATAAATGGTTTCGGTCAATCAATTGGAAGAAACTGGAGGCAAGAGAATTTCAGCCAAAGTTCAAACCAGATGTGAATGGCATAGACTGTACAGCTAACTTTGACCAATGTTGGACGGCAATGCCTCCTGTTGATTCACCAGCATCCACACCTACAGCTTCTGACCATTTTCAGGGCTACACTTACGTGGCACCAAATCCTTGGCTTTCATCTGGCTAG 1410 0.4305 MVSTSQKKSIHSLLAANLSKLSIPSSSSSSSTSNHDFDFCPFSSDDPNPSPSTAILGSPQVIQSRSHSFVGPSPRFAQSSNSLFLLNEELDSQSEDDAEETDDDRSRLGTDFAVDGIHVGASHDLAEKVASKIGPGDFQILRVVGQGAFGKVFLVRKKCDPSDGADGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKSGIVHRDLKPENILMDAEGHVMLTDFGMAKEIDESGRSNSLCGTIEYMAPEIILAKGHNKEADWWSIGILLYEMLTGKAPFTHANRKKLQEKIVKEKVKLPPMVSSEAHSLLKGLLQKDPSIRLGNGPNGDEQIKTHKWFRSINWKKLEAREFQPKFKPDVNGIDCTANFDQCWTAMPPVDSPASTPTASDHFQGYTYVAPNPWLSSG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0842 469 Pfam Protein kinase domain 138 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0842 469 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Sto12g0842 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Sto12g0842 469 Gene3D Phosphorylase Kinase; domain 1 137 446 - -
Sto12g0842 469 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 468 - -
Sto12g0842 469 SMART serkin_6 138 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0842 469 Pfam Protein kinase C terminal domain 422 459 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto12g0842 469 ProSiteProfiles AGC-kinase C-terminal domain profile. 402 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto12g0842 469 ProSiteProfiles Protein kinase domain profile. 138 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g0842 469 PANTHER RIBOSOMAL PROTEIN S6 KINASE 5 468 - -
Sto12g0842 469 SMART pkinase_C_6 402 461 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto12g0842 469 SUPERFAMILY Protein kinase-like (PK-like) 136 461 IPR011009 -
Sto12g0842 469 MobiDBLite consensus disorder prediction 21 56 - -
Sto12g0842 469 ProSitePatterns Protein kinases ATP-binding region signature. 144 174 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0842 Sto-Chr12 5282603 5285677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0842 59 462 AGC Kinase Gene Family AT3G08720 61.369 7.59e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Sto12g0842 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0842 K04688 - gmx:100798259 652.129