Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0841 ATGTCTCCTACGTCCGCCCTCGCCGATTCCCCTATCTCCGGCGACTGCGATGGTTCCCTTCCCGCCTCCGGAGAGATCATGCTCTTCGGAGTTAGGGTTGTCGTTGATTCCATGAGGAAGAGCGTCAGTATGAATAATCTCTCTCAGTACGAGCATCCTCAGGATGCCTCCAATACTAATAAGGAAGATGCTCTCACCGCCGGTTATGCCTCCGCCGATGAAGCCGCTCCTCACAATTCCGCCAGGCATCGCGAGCGTGAGCGTAAGCGAGGTGTTCCATGGACGGAGGAAGAGCACAAGCTGTTCTTGCTGGGATTGCAGAAAGTTGGGAAAGGTGATTGGAGAGGGATCTCAAGGAATTACGTGAAGACTCGGACGCCAACACAGGTAGCGAGCCACGCTCAGAAGTACTTTCTCCGGCGAAGCAATCTTAATCGCCGACGCCGTAGATCCAGCCTTTTTGACATCACCACCGACACGGTCTCTGCAACCCCAATGGAAGATGAACAGATCCAGCATCAAGATTATGCATCAAATTCAAATCCTGTGTGCCCTGCAACCTCTGAAACTAGCAACATCAATGGATTTCCATTGATGCCAGTATATTCAATGGGCGTTGGTTCTGGAGTGATTTCAGTGCCAGCTGGGAATCCAATGGAAAAACTCACTCTGGGACAAGGAATTGTAGATCACAATGGGCCACCCCAGCTAGTCCGTTCAATTCCATTTGTTCCTGATCCTAAAGCTTCCACAGCATCTAATATCGCCTCAAGTTCGAGTTCACCTGTTGATCCACCAATGTTGTCTCTGGGGCTATCCTTGTCATCTGATCAAAGACAGACTTCATCAAGGCATTCATCCATAAGTGTGATGCCTTGTTTCAACAATGGAGATAACATCATAAGTGTTGCTTAA 915 0.494 MSPTSALADSPISGDCDGSLPASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDASNTNKEDALTAGYASADEAAPHNSARHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSATPMEDEQIQHQDYASNSNPVCPATSETSNINGFPLMPVYSMGVGSGVISVPAGNPMEKLTLGQGIVDHNGPPQLVRSIPFVPDPKASTASNIASSSSSPVDPPMLSLGLSLSSDQRQTSSRHSSISVMPCFNNGDNIISVA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0841 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Sto12g0841 304 MobiDBLite consensus disorder prediction 250 289 - -
Sto12g0841 304 MobiDBLite consensus disorder prediction 249 289 - -
Sto12g0841 304 Gene3D - 92 144 - -
Sto12g0841 304 PANTHER KIN2 20 304 - -
Sto12g0841 304 SMART sant 90 140 IPR001005 -
Sto12g0841 304 MobiDBLite consensus disorder prediction 77 92 - -
Sto12g0841 304 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Sto12g0841 304 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 20 304 - -
Sto12g0841 304 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Sto12g0841 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Sto12g0841 304 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Sto12g0841 304 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Sto12g0841 304 CDD SANT 93 138 IPR001005 -
Sto12g0841 304 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0841 Sto-Chr12 5276643 5278287 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g0841 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0841 - - aip:107632799 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1482 3 10906454 10907973 Sto12g0841 12 5276643 5278287 CCT