Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0834 ATGAATGCTGGGACTTCAAGAGGAAATGCACAAGGTTTCAACCTAAGCTCTCTTAGGAAGCTACCAGATGTGAAAAGTACAGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAACAAGTAGTTCAGTCTGAAGGAAGAAGAGAAGCTATGTATCAAAAGCAGAACCTAACACAACAAGAGAAAGACACAGAATATTTGATGCTTGGCTTACCAGTAGTCTTAAAGGGACTAAAAGATGAGTTATCTGAAGTAAAGAAAGCAGCCAGCATAGAGCATCACAGTTTCATCACTTTGTGCTCCACTTTGAATGCTCACGTCACCGAAATTCGCCAGATTATGACAAGCTGTGGCAATACTGAAAGAGGTGGATTTGTCAGGGAAATGAAAGGGTTTCTAGAGGAATGTGAGGAAGAACTAAAGATTGTGAAAGAAGAGCAGATAAGGATAATGGAGCTTGTGAAGAAAACAAATGAGTATTATCTAGCAGGGGGGTCCAAAGACAATATGTCAAACTCAAACCCCTTTCAACTCTTTGTTATTGTGAAGGATTTTGTTGACATGGTAGATCAGGCTTGCTTAGAACTtaagaagaagatggaaaagAAGAATGTAGGAGTTGAAGCAGTATTAACACCACCTTTGTCACCATCAAGGAAGGTTCCACTAAGATTTCCAAACTTTGATTTCCATTTTCTGTCAAATATGCCAGCAACAACATCTTTCAGCCAATCAGAAGATGATTTCTGA 750 0.3853 MNAGTSRGNAQGFNLSSLRKLPDVKSTDGKTSLLHFIVEQVVQSEGRREAMYQKQNLTQQEKDTEYLMLGLPVVLKGLKDELSEVKKAASIEHHSFITLCSTLNAHVTEIRQIMTSCGNTERGGFVREMKGFLEECEEELKIVKEEQIRIMELVKKTNEYYLAGGSKDNMSNSNPFQLFVIVKDFVDMVDQACLELKKKMEKKNVGVEAVLTPPLSPSRKVPLRFPNFDFHFLSNMPATTSFSQSEDDF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0834 249 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 215 IPR015425 -
Sto12g0834 249 Pfam Formin Homology 2 Domain 1 189 IPR015425 -
Sto12g0834 249 Coils Coil 126 153 - -
Sto12g0834 249 Gene3D Formin, FH2 domain 1 208 IPR042201 -
Sto12g0834 249 PANTHER FORMIN-RELATED 1 243 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto12g0834 249 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 205 - -
Sto12g0834 249 PANTHER FORMIN-LIKE PROTEIN 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0834 Sto-Chr12 5234656 5235405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0834 1 247 FH2 protein (formin) Gene Family AT1G70140 41.948 1.93e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0834 - - gmx:100819989 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0834 12 5234656 5235405 Sto12g0834 12 5234656 5235405 ECH