Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0824 TTGCTCCATTCGCATGCTCTCTCAACCGCCTCCACCCAATACTCTCACTCTCCTTCCTTCATGTCTCTCAAGAGgcgtcccgaagaccccaaacCTAAATCCGACTGTGCCGCCCCTGAAGATAAGCGTAGAAAGGGCCCTGCTTTCACTAATGTGGTGCGTGAGGTGATGAAGTTGCATTCAGTTCGGCATCTGCTGGAGCCCATTCTAGAGCCCTTGATTCGAAGAGTGGTTAAGGAGGAAGTGGAATTGGCCCTGAGGAGGCATTTAGCCAGCTTGAAACAGACTTGTGGGAAGGAGATACATGTTTATGAATCAAGAAGCCTGCAGCTACAGTTTGAAAACAACATATCTCTTCCGGTCTTCACTGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAGGTTTAGTTGATTCCCTGAAGGGGGAGGTTGTAAGTTCAGGACCTGAATCCTCAGCTAGGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGATGAAAATGACATTTGGGTGTCAGAAGATTTCAAAAACAAcatagtgagagagagagaaggaaaaaagGCTCTTCTTATGGGAGATGTAGTTTTGCATCTCAAAGATGGTGTAGGAATGGTGGGTGAAATTTCATTTACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGTGCAAGAGTTGTGGATAACTTTGATGGAATTATAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACCGAGGAGAATTGTACAGGAAGCACCACCCACCTAGTTTGTTTGATGAAGTTTGGAGACTAGAAAAGATTGGTAAAGATGGAGCTTTCCACAAGCGTTTGGCTCGGGAAAGGATCAATAGTGTGAAGGATTTCCTCACACTTCTCAATCTAGACCCAGTAAAGCTACGCAGTATACTGGGCACAGGTATGTCTGCAAAGATGTGGGAGGTAACAGTGGAGCATGCAAGAACATGTGTACTGGACACTCGAAGATACCTGtactttccttctttttctcaaCCTAAAACTGGCGTTGTCTTCAATGCTGTGGGTCAAGTGACAGGGTTGCTGTCTGAATGCCAGTATGTTCCTGTGGATAAGCTGTCTGAAACAGAAAAGGCTGAAGCTCAAAATTTTGTCATTTCTGCATATAAACAAGGGGAGAATGTTGCCTCTTTTGAGGATGAAGCCTCTCTTATGGATGGCTCTTCACACTTGACTAATGCACTCTACTCTCCAAGCTCACCCAAAACAGAAGGATCTAGTGCAAACAAGGTTTTGGCTCCACAAAAGACTAGTGGGTTTGATTACACACAAGCAAGTGCCTCCTCTCCAGATATAATGTCATCTATATATTCTGTTGGTGGGCCTAGCGGCTTGGATGATTACTGCTTGTCCAATATGGATAGCATAGGGCTTAGATATGATCCAACTCTTGGTTTTCCACTCCAAGTCACCAACTCTTTGATCTGTGAAACAGACCCTTTGGGCCATCCTTTTGGAGATGAAGATCAGTTGCAATTCTTTGATACTACAGACATTCAGTCTCAGTGTCATTTTCTGGAATCACAAGCAGATTTGCAGAGTGCTGTTGATGGCTTCATGCTGGCTCGTTCCACAGCCTTGGCCATTGATAAAGCTCAGAGGAGATGGAGGAAGCTGTTCAATGTCCTGAAATGGTTCATGGTGGGGAATATCAAATCAAAAAGAAGTCGTGTTCGAGATAATAGTGAAAGATACATCAAAGGGTTGTGA 1776 0.4268 LLHSHALSTASTQYSHSPSFMSLKRRPEDPKPKSDCAAPEDKRRKGPAFTNVVREVMKLHSVRHLLEPILEPLIRRVVKEEVELALRRHLASLKQTCGKEIHVYESRSLQLQFENNISLPVFTGARIEGEDGSNLRIGLVDSLKGEVVSSGPESSARVEIVVLEGDFEDENDIWVSEDFKNNIVREREGKKALLMGDVVLHLKDGVGMVGEISFTDNSSWTRSRRFRLGARVVDNFDGIIIREAKTESFIVRDHRGELYRKHHPPSLFDEVWRLEKIGKDGAFHKRLARERINSVKDFLTLLNLDPVKLRSILGTGMSAKMWEVTVEHARTCVLDTRRYLYFPSFSQPKTGVVFNAVGQVTGLLSECQYVPVDKLSETEKAEAQNFVISAYKQGENVASFEDEASLMDGSSHLTNALYSPSSPKTEGSSANKVLAPQKTSGFDYTQASASSPDIMSSIYSVGGPSGLDDYCLSNMDSIGLRYDPTLGFPLQVTNSLICETDPLGHPFGDEDQLQFFDTTDIQSQCHFLESQADLQSAVDGFMLARSTALAIDKAQRRWRKLFNVLKWFMVGNIKSKRSRVRDNSERYIKGL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0824 591 MobiDBLite consensus disorder prediction 1 20 - -
Sto12g0824 591 MobiDBLite consensus disorder prediction 22 44 - -
Sto12g0824 591 PANTHER CALMODULIN-BINDING PROTEIN 60 A 21 576 - -
Sto12g0824 591 PANTHER OS02G0177800 PROTEIN 21 576 IPR012416 GO:0005516
Sto12g0824 591 Pfam Calmodulin binding protein-like N-terminal domain 109 254 IPR046831 -
Sto12g0824 591 MobiDBLite consensus disorder prediction 1 44 - -
Sto12g0824 591 Pfam Calmodulin binding protein C-terminal domain 338 399 IPR046829 -
Sto12g0824 591 Pfam Calmodulin binding protein central domain 267 332 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0824 Sto-Chr12 5179496 5182641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0824 21 391 Calmodulin-binding Proteins AT5G62570 62.264 5.23e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0824 - - gmx:100793156 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0824 12 5179496 5182641 Sto12g0824 12 5179496 5182641 ECH