Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0816 ATGGGATTGAAAGAATATTTGATGAAATGTGTTCCATTTGCAGCGATGGCAATGGTGGAGTGTATGGATGTGGGGTTGACCACATTAGGCAAAGCAGCCATTTCCAAAGGAATGAACTACCACATCTTTATTGTCTACTCTAACGCTCTTGCCTCTCTCATTCTCCTTCCTTCCCTTTTCTTCTTGAACAGAGCACATAGTCCTCCACTTTCTTTCTCCATTCTCTGCAAATTCTTCCTCCTTAGCCTTATTGGAATAACTACGATGCAGAATTGTGCTATGACGGGTATAAGCTACAGTTCCCCCACTCTTGGATCTGCTATGAACAACTTGATCCCTGCATTCACTTTTGTGCTGGCTGCCATCTTCAGGATTGAGAAGATAGATATTAGAAGCTCAAAAAGCCAGATCAGAATGTTGGGTACTGTAGTGTCCATCTCAGGAGCATTGATTGTGACACTTTACAAAGGAGCTTCCATTGGAGGTTCTCCATTTCATGAGAATGTTTCTCAACCATTCTTAATGGCTCAAACTGATAATTGGGTCATTGGGGGTCTCTTTCTTGCTACTGCTTATATATCTCTTGCACTATGGAATATTGCTCAGGCAGTAGTTCTTAGAGGATATCCATCTCAGTTGACCATAGTGGCATTCTCTTCCCTGTTTGGAGCCATCCAATCCACCATACTCTCTCTGATTGTAGTCAAAGATCCCAATGCTTGGATAATAAGTCCTGATATTGAGCTCATCTCCATTGTCTACGGGGGGATATGTGGATATGTGGTGAGTTATCTAGTGATGACATGGTGCATAGACAAGAAAGGGCCTATATTTGTTGCTATGTTCAAGCCTTTGAAGATTGGCATTGCTGCCTTTATGGGAGCTGCCTTCCTTGGTGACACACTCCATATTGGCAGTGTGATTGGATCAATAGTAATCGTTATTGGGTTTTACACTGTATTGTGGGCACAATCCAAAGAGCAAAATGACAACTCCCAAAAAGTTTATACACAACCATCTTCGCCCTCACGCAGGAGCCCCCTACTTGAGAGTCATATTCGTGATGAAGCTAATGTTTTGGCATAA 1086 0.4245 MGLKEYLMKCVPFAAMAMVECMDVGLTTLGKAAISKGMNYHIFIVYSNALASLILLPSLFFLNRAHSPPLSFSILCKFFLLSLIGITTMQNCAMTGISYSSPTLGSAMNNLIPAFTFVLAAIFRIEKIDIRSSKSQIRMLGTVVSISGALIVTLYKGASIGGSPFHENVSQPFLMAQTDNWVIGGLFLATAYISLALWNIAQAVVLRGYPSQLTIVAFSSLFGAIQSTILSLIVVKDPNAWIISPDIELISIVYGGICGYVVSYLVMTWCIDKKGPIFVAMFKPLKIGIAAFMGAAFLGDTLHIGSVIGSIVIVIGFYTVLWAQSKEQNDNSQKVYTQPSSPSRRSPLLESHIRDEANVLA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0816 361 PANTHER WAT1-RELATED PROTEIN 8 345 - -
Sto12g0816 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Sto12g0816 361 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020|GO:0016021
Sto12g0816 361 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Sto12g0816 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 326 - -
Sto12g0816 361 PANTHER WAT1-RELATED PROTEIN 8 345 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0816 Sto-Chr12 5135552 5141956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0816 1 356 Nodulin-like Gene Family AT3G28050 45.257 2.27e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0816 - - jre:108991175 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1092 11 11008865 11011181 Sto12g0816 12 5135552 5141956 ECH
Sto12g0816 12 5135552 5141956 Sto12g0816 12 5135552 5141956 ECH