Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0811 ATGGCAGCTCGAAGGCTTTCCTCTCTGCTTACTCGctctttctctgcttctctACTTCACTCGCCAGTATCAGAATCATTGCTTCAAAAAAATCCTCATAAATTGTGGTGTGTCCCAGGAAGAATCAGTGGCCTGCGCAGGAACATAAACAGATATAGCACAGCAGCCGCAGTTGAAGAACTAATCACTCCCCAAGTTGAAGTAAATTACACACAGCATCTCATAAATGGCCAATTTGTTGATGCTGCATCagGGAAGACATTTCCAGCATATGACCCTCGCACAGGAGAAGTTATTGCTCGTCTTGCAGAAGGCGATGCCCAAGATATCAACCGTGCAGTCTCAGCAGCTCGCAAGGCCTTCGATGAAGGACCTTGGCCAAAAATGCCTGCTTACGAAAGATGTCGAATACTGCTTCGATTTGCTGATTTGGTAGAGAAGCATAGCAACGAGCTTGCTGCTCTGGAGACATGGAACAATGGGAAGCCATTTGAACAGTCTGCTAAATCTGAATTACCCATGTTTGTGCGTCTGTTTCACTACTATGCtgGTTGGGCAGATAAAATCCATGGCTTGACAGTACCAGCCGATGGAGATTACCATGTGCAAGTATTGCATGAACCAATTGGCGTTGCAGGGCAAATTATACCATGGAACTTCCCTCTCCTAATGTTTGCTTGGAAAGTTGGACCGGCTCTAGCTTGTGGGAACACCATTGTTCTCAAGACAGCAGAGCAGACTCCTCTCACTGCTCTCTATGTGGCAAAACTACTCCACGAGGCTGGTCTACCCCCGGGGGTTTTGAATGTGGTGTCAGGGTATGGTCCCACTGCTGGTGCAGCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCATTCACTGGATCAACTGAGACAGGAAAAACCGTGCTTGAATTGGCTGCAAGAAGCAACCTTAAGCCCGTGACATTAGAGCTGGGAGGGAAATCGCCTTTCATAGTATTCGAGGATGCCGATGTTGACAAGGCAGTAGAACTTGCACACTTTGCTCTGTTCTTCAACCAGGGGCAATGCTGCTGTGCAGGGTCTCGTACCTTCGTGCACGAGAGAATCTACGATGAGTTCCTAGAGAAAGCAAAGGCACGTGCTTTGAGACGTACAGTGGGCGATCCCTTCAAGAAAGGGGTGGAACAAGGTCCTCAGATAGACGTGGAACAGTTCGAGAAAGTGCTGAGGTACATTCGATCCGGAATTGAAAGCAAGGCTACACTTGAATGTGGGGGTCACAGACTTGGGTCGAGAGGCTTCTTCATCGAGCCAACGGTTTTCTCCAATGTGGAAGATGATATGTTGATAGCCAAGGATGAAATCTTCGGCCCCGTTCAGACCATATTGAAATTCAAGGACATTGATGAAGTGATACGGAGGGCGAATAGGACGACGTATGGTCTAGCTGCGGGAGTGTTCACGAAGAACGTGGAGACGGCGAATAGAATGATGAGGGCACTGAGGGTAGGGACGGTGTGGGTGAATTGCTTTGATGTGTTCGATGCTGCCATTCCCTTTGGTGGCTACAAGATGAGTGGCACGGGGAGGGAGAAGGGAATCTACAGTCTCAATAACTATTTGCAAATTAAAGCTGTCGTTTCCCCTTTGAACAATCCTGCTTGGATCTAA 1656 0.4746 MAARRLSSLLTRSFSASLLHSPVSESLLQKNPHKLWCVPGRISGLRRNINRYSTAAAVEELITPQVEVNYTQHLINGQFVDAASGKTFPAYDPRTGEVIARLAEGDAQDINRAVSAARKAFDEGPWPKMPAYERCRILLRFADLVEKHSNELAALETWNNGKPFEQSAKSELPMFVRLFHYYAGWADKIHGLTVPADGDYHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTETGKTVLELAARSNLKPVTLELGGKSPFIVFEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKAKARALRRTVGDPFKKGVEQGPQIDVEQFEKVLRYIRSGIESKATLECGGHRLGSRGFFIEPTVFSNVEDDMLIAKDEIFGPVQTILKFKDIDEVIRRANRTTYGLAAGVFTKNVETANRMMRALRVGTVWVNCFDVFDAAIPFGGYKMSGTGREKGIYSLNNYLQIKAVVSPLNNPAWI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0811 551 SUPERFAMILY ALDH-like 66 545 IPR016161 GO:0016491
Sto12g0811 551 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 345 356 IPR016160 GO:0016491
Sto12g0811 551 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 317 324 IPR029510 GO:0016491
Sto12g0811 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 539 IPR016162 GO:0016491
Sto12g0811 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 321 510 IPR016163 GO:0016620
Sto12g0811 551 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 551 - -
Sto12g0811 551 Pfam Aldehyde dehydrogenase family 79 541 IPR015590 GO:0016491
Sto12g0811 551 CDD ALDH_F2BC 68 542 - -
Sto12g0811 551 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 38 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0811 Sto-Chr12 5097442 5099912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0811 1 551 Aldehyde Dehydrogenase Gene Family AT3G48000 78.221 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0811 K00128 - gmx:100811501 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0811 12 5097442 5099912 Sto12g0811 12 5097442 5099912 ECH